Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFC3P40938 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFC3P40938 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFC3P40938 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFC3P40938 ASNSP1-201ENST00000518311 1939 ntBASIC4.02□□□□□ -1.77
RFC3P40938 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.02□□□□□ -1.77
RFC3P40938 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFC3P40938 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFC3P40938 FCF1P5-201ENST00000406490 482 ntBASIC4.02□□□□□ -1.77
RFC3P40938 MIR1193-201ENST00000408109 78 ntBASIC4.02□□□□□ -1.77
RFC3P40938 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFC3P40938 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.02□□□□□ -1.77
RFC3P40938 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.02□□□□□ -1.77
RFC3P40938 NANOGP6-201ENST00000429190 847 ntBASIC4.02□□□□□ -1.77
RFC3P40938 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.02□□□□□ -1.77
RFC3P40938 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFC3P40938 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.02□□□□□ -1.77
RFC3P40938 ACTR3P2-201ENST00000439585 1257 ntBASIC4.02□□□□□ -1.77
RFC3P40938 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.02□□□□□ -1.77
RFC3P40938 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.02□□□□□ -1.77
RFC3P40938 EIF4A1P11-201ENST00000451239 222 ntBASIC4.02□□□□□ -1.77
RFC3P40938 AC041039.1-201ENST00000485656 536 ntBASIC4.02□□□□□ -1.77
RFC3P40938 PARP4P3-201ENST00000510265 317 ntBASIC4.02□□□□□ -1.77
RFC3P40938 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.02□□□□□ -1.77
RFC3P40938 MRPL49P2-201ENST00000521066 465 ntBASIC4.02□□□□□ -1.77
RFC3P40938 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.02□□□□□ -1.77
RFC3P40938 CYCSP28-201ENST00000534284 321 ntBASIC4.02□□□□□ -1.77
RFC3P40938 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFC3P40938 AC068714.1-201ENST00000559623 800 ntBASIC4.02□□□□□ -1.77
RFC3P40938 AC090515.3-201ENST00000560431 315 ntBASIC4.02□□□□□ -1.77
RFC3P40938 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.02□□□□□ -1.77
RFC3P40938 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.02□□□□□ -1.77
RFC3P40938 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.02□□□□□ -1.77
RFC3P40938 AC091178.1-203ENST00000584586 279 ntBASIC4.02□□□□□ -1.77
RFC3P40938 AC005520.3-201ENST00000602874 370 ntBASIC4.02□□□□□ -1.77
RFC3P40938 AC025946.2-201ENST00000603398 234 ntBASIC4.02□□□□□ -1.77
RFC3P40938 AC113403.1-201ENST00000604910 193 ntBASIC4.02□□□□□ -1.77
RFC3P40938 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.02□□□□□ -1.77
RFC3P40938 AL445567.2-201ENST00000618935 498 ntBASIC4.02□□□□□ -1.77
RFC3P40938 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.02□□□□□ -1.77
RFC3P40938 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.02□□□□□ -1.77
RFC3P40938 AL445437.1-201ENST00000623157 3087 ntBASIC4.02□□□□□ -1.77
RFC3P40938 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFC3P40938 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFC3P40938 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.02□□□□□ -1.77
RFC3P40938 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFC3P40938 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFC3P40938 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFC3P40938 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFC3P40938 AL451142.2-201ENST00000429076 2090 ntBASIC4.01□□□□□ -1.77
RFC3P40938 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
RFC3P40938 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
RFC3P40938 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
RFC3P40938 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RFC3P40938 AC011155.1-201ENST00000316512 456 ntBASIC4.01□□□□□ -1.77
RFC3P40938 OR56B2P-201ENST00000317102 954 ntBASIC4.01□□□□□ -1.77
RFC3P40938 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RFC3P40938 SNORD74.4-201ENST00000364129 80 ntBASIC4.01□□□□□ -1.77
RFC3P40938 RNU1-132P-201ENST00000364300 164 ntBASIC4.01□□□□□ -1.77
RFC3P40938 RNU1-63P-201ENST00000383902 164 ntBASIC4.01□□□□□ -1.77
RFC3P40938 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.01□□□□□ -1.77
RFC3P40938 MTCO3P21-201ENST00000430791 643 ntBASIC4.01□□□□□ -1.77
RFC3P40938 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.01□□□□□ -1.77
RFC3P40938 UBE2V1P3-201ENST00000439651 417 ntBASIC4.01□□□□□ -1.77
RFC3P40938 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.01□□□□□ -1.77
RFC3P40938 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.01□□□□□ -1.77
RFC3P40938 AC009963.2-201ENST00000453431 138 ntBASIC4.01□□□□□ -1.77
RFC3P40938 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.01□□□□□ -1.77
RFC3P40938 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.01□□□□□ -1.77
RFC3P40938 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.01□□□□□ -1.77
RFC3P40938 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RFC3P40938 AC021205.1-201ENST00000468797 348 ntBASIC4.01□□□□□ -1.77
RFC3P40938 UQCRHP4-201ENST00000471686 272 ntBASIC4.01□□□□□ -1.77
RFC3P40938 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.01□□□□□ -1.77
RFC3P40938 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.01□□□□□ -1.77
RFC3P40938 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.01□□□□□ -1.77
RFC3P40938 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.01□□□□□ -1.77
RFC3P40938 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.01□□□□□ -1.77
RFC3P40938 TRAV8-5-201ENST00000537369 341 ntBASIC4.01□□□□□ -1.77
RFC3P40938 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.01□□□□□ -1.77
RFC3P40938 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.01□□□□□ -1.77
RFC3P40938 TVP23BP1-201ENST00000557500 617 ntBASIC4.01□□□□□ -1.77
RFC3P40938 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RFC3P40938 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.01□□□□□ -1.77
RFC3P40938 AL020997.2-201ENST00000602607 184 ntBASIC4.01□□□□□ -1.77
RFC3P40938 AC090181.2-201ENST00000602975 672 ntBASIC4.01□□□□□ -1.77
RFC3P40938 BPIFA4P-203ENST00000603168 689 ntBASIC4.01□□□□□ -1.77
RFC3P40938 MTCO2P22-201ENST00000603246 681 ntBASIC4.01□□□□□ -1.77
RFC3P40938 AC090948.2-201ENST00000607363 564 ntBASIC4.01□□□□□ -1.77
RFC3P40938 AC092653.1-201ENST00000608509 531 ntBASIC4.01□□□□□ -1.77
RFC3P40938 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.01□□□□□ -1.77
RFC3P40938 AC023043.4-201ENST00000612081 449 ntBASIC4.01□□□□□ -1.77
RFC3P40938 AC116447.1-201ENST00000613153 453 ntBASIC4.01□□□□□ -1.77
RFC3P40938 AC107905.1-201ENST00000616204 426 ntBASIC4.01□□□□□ -1.77
RFC3P40938 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RFC3P40938 AL158163.1-201ENST00000603915 1649 ntBASIC4.01□□□□□ -1.77
RFC3P40938 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.01□□□□□ -1.77
RFC3P40938 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RFC3P40938 PHKBP1-201ENST00000450951 1951 ntBASIC4.01□□□□□ -1.77
RFC3P40938 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms