Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 RNA5SP130-201ENST00000364431 114 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HOXA6P31267 MIR200C-201ENST00000384980 68 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 RNA5SP372-201ENST00000390836 115 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 AL080315.1-201ENST00000406055 466 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 SNORA11.1-201ENST00000408133 129 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 RN7SKP235-201ENST00000410662 305 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 RN7SKP182-201ENST00000410772 298 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 TCEA1P4-201ENST00000415066 844 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 AC062016.2-201ENST00000420950 676 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA6P31267 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA6P31267 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA6P31267 NMNAT1P2-201ENST00000435192 860 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 ELOCP10-201ENST00000440624 327 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA6P31267 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA6P31267 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA6P31267 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXA6P31267 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA6P31267 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXA6P31267 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.34□□□□□ -1.71
HOXA6P31267 ATP1B1P1-201ENST00000509767 915 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 RNA5SP249-201ENST00000516127 99 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA6P31267 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXA6P31267 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA6P31267 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA6P31267 RN7SL703P-201ENST00000578485 302 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 HMGB2P1-201ENST00000591146 634 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA6P31267 ELOCP34-201ENST00000604436 327 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 AL139286.1-201ENST00000604465 483 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA6P31267 AC090912.3-201ENST00000609775 533 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 RMST_9.1-201ENST00000619945 193 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 AL356121.2-201ENST00000624715 780 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 AC138627.1-204ENST00000641894 765 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA6P31267 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA6P31267 AC095050.2-201ENST00000510748 1458 ntBASIC4.34□□□□□ -1.71
HOXA6P31267 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA6P31267 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
HOXA6P31267 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA6P31267 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.72
HOXA6P31267 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA6P31267 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.34□□□□□ -1.72
HOXA6P31267 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA6P31267 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA6P31267 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA6P31267 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HOXA6P31267 AC093311.1-201ENST00000506586 2021 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 AC100778.3-201ENST00000580060 1750 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 AC092162.3-201ENST00000624511 1624 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 AL627171.1-201ENST00000618845 1308 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 RNA5SP175-201ENST00000364275 119 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 AP000357.1-201ENST00000409926 1165 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 RNA5SP146-201ENST00000410743 123 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 MFSD13B-201ENST00000420133 1290 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 AC018644.1-201ENST00000429934 551 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA6P31267 AL133547.1-201ENST00000448546 220 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 RHEBP2-201ENST00000450289 600 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 VN1R32P-201ENST00000452234 905 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 RPL23AP81-201ENST00000455252 467 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 RPL21P71-201ENST00000465598 459 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA6P31267 AC146944.2-203ENST00000502493 354 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA6P31267 FTH1P21-201ENST00000512179 511 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 AC139495.1-202ENST00000513164 354 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA6P31267 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 AC015912.2-201ENST00000571053 181 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA6P31267 AC010680.3-201ENST00000604215 520 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 AC039056.2-201ENST00000622261 511 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 AC009452.1-201ENST00000640823 606 ntBASIC4.33□□□□□ -1.72
HOXA6P31267 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HOXA6P31267 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA6P31267 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXA6P31267 RLIMP1-201ENST00000339626 1680 ntBASIC4.32□□□□□ -1.72
HOXA6P31267 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HOXA6P31267 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXA6P31267 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.32□□□□□ -1.72
HOXA6P31267 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXA6P31267 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HOXA6P31267 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXA6P31267 RPL21P65-201ENST00000406094 466 ntBASIC4.32□□□□□ -1.72
HOXA6P31267 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXA6P31267 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXA6P31267 RAB9AP5-201ENST00000437794 597 ntBASIC4.32□□□□□ -1.72
HOXA6P31267 UBE2V1P3-201ENST00000439651 417 ntBASIC4.32□□□□□ -1.72
HOXA6P31267 RAB9AP2-201ENST00000443911 597 ntBASIC4.32□□□□□ -1.72
HOXA6P31267 RPL6P5-201ENST00000445678 828 ntBASIC4.32□□□□□ -1.72
HOXA6P31267 RNA5SP246-201ENST00000458909 119 ntBASIC4.32□□□□□ -1.72
HOXA6P31267 AP002371.1-201ENST00000463604 433 ntBASIC4.32□□□□□ -1.72
HOXA6P31267 AC090686.1-201ENST00000481577 749 ntBASIC4.32□□□□□ -1.72
HOXA6P31267 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXA6P31267 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms