Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 AL132640.2-201ENST00000559968 1698 ntBASIC4.08□□□□□ -1.76
SDC1P18827 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.08□□□□□ -1.76
SDC1P18827 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.08□□□□□ -1.76
SDC1P18827 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.08□□□□□ -1.76
SDC1P18827 AC092474.3-201ENST00000603022 568 ntBASIC4.08□□□□□ -1.76
SDC1P18827 AC113403.1-201ENST00000604910 193 ntBASIC4.08□□□□□ -1.76
SDC1P18827 KATNBL1P5-201ENST00000605015 517 ntBASIC4.08□□□□□ -1.76
SDC1P18827 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.08□□□□□ -1.76
SDC1P18827 AC025175.1-201ENST00000606482 759 ntBASIC4.08□□□□□ -1.76
SDC1P18827 AC064801.1-201ENST00000612025 407 ntBASIC4.08□□□□□ -1.76
SDC1P18827 AP004607.9-201ENST00000618202 316 ntBASIC4.08□□□□□ -1.76
SDC1P18827 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SDC1P18827 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SDC1P18827 AC008013.2-202ENST00000637965 364 ntBASIC4.08□□□□□ -1.76
SDC1P18827 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SDC1P18827 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.08□□□□□ -1.76
SDC1P18827 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.08□□□□□ -1.76
SDC1P18827 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SDC1P18827 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SDC1P18827 MAPK10-304ENST00000641341 3984 ntBASIC4.07□□□□□ -1.76
SDC1P18827 AL450326.2-201ENST00000421913 1962 ntBASIC4.07□□□□□ -1.76
SDC1P18827 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SDC1P18827 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.07□□□□□ -1.76
SDC1P18827 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SDC1P18827 KPNA2P2-201ENST00000419546 1489 ntBASIC4.07□□□□□ -1.76
SDC1P18827 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SDC1P18827 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SDC1P18827 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SDC1P18827 RN7SKP103-201ENST00000363848 320 ntBASIC4.07□□□□□ -1.76
SDC1P18827 RHOT1P2-201ENST00000366423 333 ntBASIC4.07□□□□□ -1.76
SDC1P18827 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SDC1P18827 MIR93-201ENST00000385024 80 ntBASIC4.07□□□□□ -1.76
SDC1P18827 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SDC1P18827 SNORA11F-201ENST00000408237 128 ntBASIC4.07□□□□□ -1.76
SDC1P18827 AL160275.2-201ENST00000412010 394 ntBASIC4.07□□□□□ -1.76
SDC1P18827 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.07□□□□□ -1.76
SDC1P18827 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SDC1P18827 AL356387.2-201ENST00000422272 243 ntBASIC4.07□□□□□ -1.76
SDC1P18827 RPS12P5-201ENST00000423449 371 ntBASIC4.07□□□□□ -1.76
SDC1P18827 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.07□□□□□ -1.76
SDC1P18827 RPL23AP1-201ENST00000428990 471 ntBASIC4.07□□□□□ -1.76
SDC1P18827 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.07□□□□□ -1.76
SDC1P18827 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.07□□□□□ -1.76
SDC1P18827 RPL10P17-201ENST00000453852 316 ntBASIC4.07□□□□□ -1.76
SDC1P18827 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.07□□□□□ -1.76
SDC1P18827 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.07□□□□□ -1.76
SDC1P18827 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.07□□□□□ -1.76
SDC1P18827 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.07□□□□□ -1.76
SDC1P18827 AC010374.1-201ENST00000503762 1237 ntBASIC4.07□□□□□ -1.76
SDC1P18827 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.07□□□□□ -1.76
SDC1P18827 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.07□□□□□ -1.76
SDC1P18827 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.07□□□□□ -1.76
SDC1P18827 IGLVIV-65-201ENST00000517313 360 ntBASIC4.07□□□□□ -1.76
SDC1P18827 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.07□□□□□ -1.76
SDC1P18827 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.07□□□□□ -1.76
SDC1P18827 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.07□□□□□ -1.76
SDC1P18827 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.07□□□□□ -1.76
SDC1P18827 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.07□□□□□ -1.76
SDC1P18827 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.07□□□□□ -1.76
SDC1P18827 NPM1P47-201ENST00000560843 856 ntBASIC4.07□□□□□ -1.76
SDC1P18827 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.07□□□□□ -1.76
SDC1P18827 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.07□□□□□ -1.76
SDC1P18827 AC022884.3-201ENST00000579571 248 ntBASIC4.07□□□□□ -1.76
SDC1P18827 RPL12P25-202ENST00000598100 674 ntBASIC4.07□□□□□ -1.76
SDC1P18827 AC015813.4-201ENST00000610469 179 ntBASIC4.07□□□□□ -1.76
SDC1P18827 Mico1.1-201ENST00000611698 204 ntBASIC4.07□□□□□ -1.76
SDC1P18827 AC011472.4-201ENST00000615848 491 ntBASIC4.07□□□□□ -1.76
SDC1P18827 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.07□□□□□ -1.76
SDC1P18827 AC140479.6-201ENST00000633535 357 ntBASIC4.07□□□□□ -1.76
SDC1P18827 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SDC1P18827 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SDC1P18827 AC093535.2-201ENST00000624769 2326 ntBASIC4.07□□□□□ -1.76
SDC1P18827 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SDC1P18827 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SDC1P18827 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SDC1P18827 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
SDC1P18827 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.07□□□□□ -1.76
SDC1P18827 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SDC1P18827 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.06□□□□□ -1.76
SDC1P18827 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.06□□□□□ -1.76
SDC1P18827 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SDC1P18827 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SDC1P18827 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SDC1P18827 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SDC1P18827 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.06□□□□□ -1.76
SDC1P18827 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SDC1P18827 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SDC1P18827 RAD1P1-201ENST00000231383 813 ntBASIC4.06□□□□□ -1.76
SDC1P18827 RNA5SP388-201ENST00000362584 119 ntBASIC4.06□□□□□ -1.76
SDC1P18827 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.06□□□□□ -1.76
SDC1P18827 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SDC1P18827 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SDC1P18827 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SDC1P18827 TAF9BP2-201ENST00000400856 499 ntBASIC4.06□□□□□ -1.76
SDC1P18827 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SDC1P18827 AL160175.1-201ENST00000428124 247 ntBASIC4.06□□□□□ -1.76
SDC1P18827 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.06□□□□□ -1.76
SDC1P18827 BX119904.1-201ENST00000432026 348 ntBASIC4.06□□□□□ -1.76
SDC1P18827 MTCO1P52-201ENST00000433928 531 ntBASIC4.06□□□□□ -1.76
SDC1P18827 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms