Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC6.66□□□□□ -1.34
CFTRP13569 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.66□□□□□ -1.34
CFTRP13569 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.66□□□□□ -1.34
CFTRP13569 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CFTRP13569 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.66□□□□□ -1.34
CFTRP13569 DPPA3P2-201ENST00000553589 478 ntBASIC6.66□□□□□ -1.34
CFTRP13569 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.66□□□□□ -1.34
CFTRP13569 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC6.66□□□□□ -1.34
CFTRP13569 AC119674.1-207ENST00000641355 633 ntBASIC6.66□□□□□ -1.34
CFTRP13569 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CFTRP13569 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CFTRP13569 AC005831.1-201ENST00000624384 1697 ntBASIC6.65□□□□□ -1.34
CFTRP13569 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CFTRP13569 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CFTRP13569 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CFTRP13569 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CFTRP13569 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
CFTRP13569 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
CFTRP13569 PEX12P1-201ENST00000400284 1048 ntBASIC6.65□□□□□ -1.35
CFTRP13569 AL358178.1-201ENST00000407698 397 ntBASIC6.65□□□□□ -1.35
CFTRP13569 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.65□□□□□ -1.35
CFTRP13569 RPL21P11-201ENST00000461458 483 ntBASIC6.65□□□□□ -1.35
CFTRP13569 DEFB109A-201ENST00000482450 265 ntBASIC6.65□□□□□ -1.35
CFTRP13569 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.65□□□□□ -1.35
CFTRP13569 AC097505.1-201ENST00000610199 565 ntBASIC6.65□□□□□ -1.35
CFTRP13569 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
CFTRP13569 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
CFTRP13569 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
CFTRP13569 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC6.65□□□□□ -1.35
CFTRP13569 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
CFTRP13569 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CFTRP13569 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CFTRP13569 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CFTRP13569 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CFTRP13569 DPY19L1P2-201ENST00000426647 915 ntBASIC6.64□□□□□ -1.35
CFTRP13569 AC005326.1-201ENST00000429197 123 ntBASIC6.64□□□□□ -1.35
CFTRP13569 EIF4A1P11-201ENST00000451239 222 ntBASIC6.64□□□□□ -1.35
CFTRP13569 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.64□□□□□ -1.35
CFTRP13569 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC6.64□□□□□ -1.35
CFTRP13569 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CFTRP13569 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.64□□□□□ -1.35
CFTRP13569 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.64□□□□□ -1.35
CFTRP13569 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.64□□□□□ -1.35
CFTRP13569 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CFTRP13569 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC6.64□□□□□ -1.35
CFTRP13569 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.64□□□□□ -1.35
CFTRP13569 AL672167.1-203ENST00000641299 2975 ntBASIC6.63□□□□□ -1.35
CFTRP13569 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CFTRP13569 AP000473.2-201ENST00000602659 1537 ntBASIC6.63□□□□□ -1.35
CFTRP13569 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.63□□□□□ -1.35
CFTRP13569 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.63□□□□□ -1.35
CFTRP13569 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.63□□□□□ -1.35
CFTRP13569 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CFTRP13569 RBMY2UP-201ENST00000453474 324 ntBASIC6.63□□□□□ -1.35
CFTRP13569 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
CFTRP13569 RN7SL271P-201ENST00000487601 295 ntBASIC6.63□□□□□ -1.35
CFTRP13569 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6.63□□□□□ -1.35
CFTRP13569 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.63□□□□□ -1.35
CFTRP13569 AC124312.6-202ENST00000623624 418 ntBASIC6.63□□□□□ -1.35
CFTRP13569 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CFTRP13569 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.63□□□□□ -1.35
CFTRP13569 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
CFTRP13569 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC6.63□□□□□ -1.35
CFTRP13569 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CFTRP13569 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC6.63□□□□□ -1.35
CFTRP13569 AC009229.4-201ENST00000623854 1947 ntBASIC6.62□□□□□ -1.35
CFTRP13569 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CFTRP13569 AL122016.1-201ENST00000403365 367 ntBASIC6.62□□□□□ -1.35
CFTRP13569 RNU6ATAC10P-201ENST00000408635 111 ntBASIC6.62□□□□□ -1.35
CFTRP13569 OR4K6P-201ENST00000416478 897 ntBASIC6.62□□□□□ -1.35
CFTRP13569 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CFTRP13569 AL591473.1-201ENST00000464297 313 ntBASIC6.62□□□□□ -1.35
CFTRP13569 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC6.62□□□□□ -1.35
CFTRP13569 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.62□□□□□ -1.35
CFTRP13569 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.62□□□□□ -1.35
CFTRP13569 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC6.62□□□□□ -1.35
CFTRP13569 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.62□□□□□ -1.35
CFTRP13569 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CFTRP13569 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CFTRP13569 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CFTRP13569 MARK2P15-201ENST00000432204 2186 ntBASIC6.62□□□□□ -1.35
CFTRP13569 AC004656.1-201ENST00000568479 4951 ntBASIC6.61□□□□□ -1.35
CFTRP13569 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.61□□□□□ -1.35
CFTRP13569 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.61□□□□□ -1.35
CFTRP13569 RNA5SP164-201ENST00000516533 110 ntBASIC6.61□□□□□ -1.35
CFTRP13569 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC6.61□□□□□ -1.35
CFTRP13569 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CFTRP13569 MIR8057-201ENST00000620957 69 ntBASIC6.61□□□□□ -1.35
CFTRP13569 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CFTRP13569 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CFTRP13569 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
CFTRP13569 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC6.61□□□□□ -1.35
CFTRP13569 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CFTRP13569 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CFTRP13569 RPS23P10-201ENST00000416185 486 ntBASIC6.6□□□□□ -1.35
CFTRP13569 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CFTRP13569 AL391219.1-201ENST00000422570 483 ntBASIC6.6□□□□□ -1.35
CFTRP13569 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CFTRP13569 AL591503.2-201ENST00000442314 1005 ntBASIC6.6□□□□□ -1.35
CFTRP13569 CYCSP35-201ENST00000451978 304 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms