Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC140113.4-201ENST00000622087 222 ntBASIC3.39□□□□□ -1.87
CD28P10747 AC091905.2-201ENST00000623143 306 ntBASIC3.39□□□□□ -1.87
CD28P10747 AC090506.2-201ENST00000624521 419 ntBASIC3.39□□□□□ -1.87
CD28P10747 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.39□□□□□ -1.87
CD28P10747 RNA5SP196-201ENST00000625967 102 ntBASIC3.39□□□□□ -1.87
CD28P10747 MIR492-201ENST00000638676 116 ntBASIC3.39□□□□□ -1.87
CD28P10747 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD28P10747 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.39□□□□□ -1.87
CD28P10747 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.39□□□□□ -1.87
CD28P10747 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.39□□□□□ -1.87
CD28P10747 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD28P10747 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD28P10747 CASC19-284ENST00000642142 1868 ntBASIC3.39□□□□□ -1.87
CD28P10747 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CD28P10747 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CD28P10747 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CD28P10747 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CD28P10747 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CD28P10747 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.38□□□□□ -1.87
CD28P10747 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CD28P10747 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CD28P10747 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CD28P10747 AC097374.1-203ENST00000400783 485 ntBASIC3.38□□□□□ -1.87
CD28P10747 RPS27AP11-201ENST00000402798 447 ntBASIC3.38□□□□□ -1.87
CD28P10747 DHFRP5-201ENST00000406944 564 ntBASIC3.38□□□□□ -1.87
CD28P10747 RNA5SP36-201ENST00000410197 133 ntBASIC3.38□□□□□ -1.87
CD28P10747 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.38□□□□□ -1.87
CD28P10747 Z74021.1-201ENST00000423610 407 ntBASIC3.38□□□□□ -1.87
CD28P10747 AC022022.1-201ENST00000430304 178 ntBASIC3.38□□□□□ -1.87
CD28P10747 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.38□□□□□ -1.87
CD28P10747 AL132765.1-201ENST00000434165 553 ntBASIC3.38□□□□□ -1.87
CD28P10747 AC114495.1-201ENST00000441274 436 ntBASIC3.38□□□□□ -1.87
CD28P10747 BUD31P2-201ENST00000449374 300 ntBASIC3.38□□□□□ -1.87
CD28P10747 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.38□□□□□ -1.87
CD28P10747 RPS20P4-201ENST00000461659 355 ntBASIC3.38□□□□□ -1.87
CD28P10747 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.38□□□□□ -1.87
CD28P10747 STMN1P2-201ENST00000508435 439 ntBASIC3.38□□□□□ -1.87
CD28P10747 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.38□□□□□ -1.87
CD28P10747 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CD28P10747 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.38□□□□□ -1.87
CD28P10747 SNORA70.17-201ENST00000516449 133 ntBASIC3.38□□□□□ -1.87
CD28P10747 RNA5SP519-201ENST00000516480 119 ntBASIC3.38□□□□□ -1.87
CD28P10747 AC104997.1-201ENST00000519761 717 ntBASIC3.38□□□□□ -1.87
CD28P10747 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.38□□□□□ -1.87
CD28P10747 CYCSP28-201ENST00000534284 321 ntBASIC3.38□□□□□ -1.87
CD28P10747 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.38□□□□□ -1.87
CD28P10747 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.38□□□□□ -1.87
CD28P10747 AL354984.3-201ENST00000604803 325 ntBASIC3.38□□□□□ -1.87
CD28P10747 AC023813.4-201ENST00000607580 580 ntBASIC3.38□□□□□ -1.87
CD28P10747 MIR8059-201ENST00000620427 81 ntBASIC3.38□□□□□ -1.87
CD28P10747 AC005086.4-201ENST00000623065 213 ntBASIC3.38□□□□□ -1.87
CD28P10747 AC019080.5-201ENST00000624891 757 ntBASIC3.38□□□□□ -1.87
CD28P10747 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.38□□□□□ -1.87
CD28P10747 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CD28P10747 CASC19-204ENST00000641001 2055 ntBASIC3.38□□□□□ -1.87
CD28P10747 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.38□□□□□ -1.87
CD28P10747 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CD28P10747 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.38□□□□□ -1.87
CD28P10747 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CD28P10747 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD28P10747 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CD28P10747 BX005019.1-201ENST00000561881 1810 ntBASIC3.37□□□□□ -1.87
CD28P10747 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD28P10747 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD28P10747 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD28P10747 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CD28P10747 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CD28P10747 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CD28P10747 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.37□□□□□ -1.87
CD28P10747 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.37□□□□□ -1.87
CD28P10747 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD28P10747 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD28P10747 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD28P10747 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CD28P10747 RNA5SP175-201ENST00000364275 119 ntBASIC3.37□□□□□ -1.87
CD28P10747 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CD28P10747 MIR195-201ENST00000385194 87 ntBASIC3.37□□□□□ -1.87
CD28P10747 RNA5SP372-201ENST00000390836 115 ntBASIC3.37□□□□□ -1.87
CD28P10747 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD28P10747 EIF4A1P3-201ENST00000411521 244 ntBASIC3.37□□□□□ -1.87
CD28P10747 VDAC1P9-201ENST00000412766 841 ntBASIC3.37□□□□□ -1.87
CD28P10747 PDSS1P1-201ENST00000422953 1114 ntBASIC3.37□□□□□ -1.87
CD28P10747 RPL21P91-201ENST00000429231 479 ntBASIC3.37□□□□□ -1.87
CD28P10747 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.37□□□□□ -1.87
CD28P10747 AC007537.2-201ENST00000472093 511 ntBASIC3.37□□□□□ -1.87
CD28P10747 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CD28P10747 UBA52P3-201ENST00000491303 382 ntBASIC3.37□□□□□ -1.87
CD28P10747 DEFB109F-201ENST00000491870 277 ntBASIC3.37□□□□□ -1.87
CD28P10747 RN7SL691P-201ENST00000494487 301 ntBASIC3.37□□□□□ -1.87
CD28P10747 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.37□□□□□ -1.87
CD28P10747 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.37□□□□□ -1.87
CD28P10747 AC010374.1-201ENST00000503762 1237 ntBASIC3.37□□□□□ -1.87
CD28P10747 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.37□□□□□ -1.87
CD28P10747 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.37□□□□□ -1.87
CD28P10747 AC034244.2-201ENST00000514668 858 ntBASIC3.37□□□□□ -1.87
CD28P10747 AC134698.5-201ENST00000519444 336 ntBASIC3.37□□□□□ -1.87
CD28P10747 OR7E10P-201ENST00000526420 991 ntBASIC3.37□□□□□ -1.87
CD28P10747 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.37□□□□□ -1.87
CD28P10747 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD28P10747 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms