Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.59□□□□□ -1.67
TPM1P09493 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.59□□□□□ -1.67
TPM1P09493 NDUFB5P1-201ENST00000508134 564 ntBASIC4.59□□□□□ -1.67
TPM1P09493 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.59□□□□□ -1.67
TPM1P09493 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.59□□□□□ -1.67
TPM1P09493 RNU4-18P-201ENST00000516751 149 ntBASIC4.59□□□□□ -1.67
TPM1P09493 RNA5SP143-201ENST00000516936 115 ntBASIC4.59□□□□□ -1.67
TPM1P09493 IGKV2-38-201ENST00000517443 247 ntBASIC4.59□□□□□ -1.67
TPM1P09493 IGKV2D-23-201ENST00000518179 286 ntBASIC4.59□□□□□ -1.67
TPM1P09493 IGHV3-32-201ENST00000519182 355 ntBASIC4.59□□□□□ -1.67
TPM1P09493 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.59□□□□□ -1.67
TPM1P09493 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.59□□□□□ -1.67
TPM1P09493 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.59□□□□□ -1.67
TPM1P09493 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.59□□□□□ -1.67
TPM1P09493 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.59□□□□□ -1.67
TPM1P09493 MIR4644-201ENST00000579929 84 ntBASIC4.59□□□□□ -1.67
TPM1P09493 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.59□□□□□ -1.67
TPM1P09493 AC012213.4-201ENST00000606457 354 ntBASIC4.59□□□□□ -1.67
TPM1P09493 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.59□□□□□ -1.67
TPM1P09493 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TPM1P09493 AC140479.6-201ENST00000633535 357 ntBASIC4.59□□□□□ -1.67
TPM1P09493 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.59□□□□□ -1.67
TPM1P09493 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TPM1P09493 AC095050.2-201ENST00000510748 1458 ntBASIC4.58□□□□□ -1.68
TPM1P09493 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TPM1P09493 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TPM1P09493 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.58□□□□□ -1.68
TPM1P09493 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
TPM1P09493 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TPM1P09493 AL109941.1-201ENST00000401925 229 ntBASIC4.58□□□□□ -1.68
TPM1P09493 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.58□□□□□ -1.68
TPM1P09493 AL365396.1-201ENST00000430854 671 ntBASIC4.58□□□□□ -1.68
TPM1P09493 AC011742.1-201ENST00000431448 434 ntBASIC4.58□□□□□ -1.68
TPM1P09493 AL627308.1-201ENST00000435693 821 ntBASIC4.58□□□□□ -1.68
TPM1P09493 CEACAMP6-201ENST00000452007 574 ntBASIC4.58□□□□□ -1.68
TPM1P09493 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.58□□□□□ -1.68
TPM1P09493 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.58□□□□□ -1.68
TPM1P09493 EIF2S2P4-201ENST00000461070 984 ntBASIC4.58□□□□□ -1.68
TPM1P09493 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
TPM1P09493 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.58□□□□□ -1.68
TPM1P09493 OR5M14P-201ENST00000506803 618 ntBASIC4.58□□□□□ -1.68
TPM1P09493 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.58□□□□□ -1.68
TPM1P09493 OR5AN2P-201ENST00000534535 896 ntBASIC4.58□□□□□ -1.68
TPM1P09493 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TPM1P09493 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.58□□□□□ -1.68
TPM1P09493 AC008147.3-201ENST00000548666 354 ntBASIC4.58□□□□□ -1.68
TPM1P09493 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.58□□□□□ -1.68
TPM1P09493 AC007424.1-203ENST00000554613 687 ntBASIC4.58□□□□□ -1.68
TPM1P09493 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.58□□□□□ -1.68
TPM1P09493 AC009101.1-201ENST00000568135 242 ntBASIC4.58□□□□□ -1.68
TPM1P09493 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.58□□□□□ -1.68
TPM1P09493 AC068020.1-201ENST00000594215 661 ntBASIC4.58□□□□□ -1.68
TPM1P09493 AC104662.1-201ENST00000604448 511 ntBASIC4.58□□□□□ -1.68
TPM1P09493 AL354984.3-201ENST00000604803 325 ntBASIC4.58□□□□□ -1.68
TPM1P09493 AC113403.1-201ENST00000604910 193 ntBASIC4.58□□□□□ -1.68
TPM1P09493 OR6R2P-201ENST00000609216 300 ntBASIC4.58□□□□□ -1.68
TPM1P09493 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.58□□□□□ -1.68
TPM1P09493 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.58□□□□□ -1.68
TPM1P09493 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.58□□□□□ -1.68
TPM1P09493 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.58□□□□□ -1.68
TPM1P09493 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TPM1P09493 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.58□□□□□ -1.68
TPM1P09493 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TPM1P09493 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.58□□□□□ -1.68
TPM1P09493 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
TPM1P09493 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TPM1P09493 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TPM1P09493 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TPM1P09493 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TPM1P09493 MTND4P10-201ENST00000446199 1363 ntBASIC4.57□□□□□ -1.68
TPM1P09493 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TPM1P09493 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TPM1P09493 MIR331-201ENST00000362302 94 ntBASIC4.57□□□□□ -1.68
TPM1P09493 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.57□□□□□ -1.68
TPM1P09493 SNORA70F-201ENST00000384142 135 ntBASIC4.57□□□□□ -1.68
TPM1P09493 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TPM1P09493 AL645927.1-201ENST00000396783 406 ntBASIC4.57□□□□□ -1.68
TPM1P09493 AC087650.1-201ENST00000431445 468 ntBASIC4.57□□□□□ -1.68
TPM1P09493 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.57□□□□□ -1.68
TPM1P09493 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.57□□□□□ -1.68
TPM1P09493 RPL36AP13-201ENST00000457490 317 ntBASIC4.57□□□□□ -1.68
TPM1P09493 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.57□□□□□ -1.68
TPM1P09493 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TPM1P09493 AC005912.1-201ENST00000495392 255 ntBASIC4.57□□□□□ -1.68
TPM1P09493 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.57□□□□□ -1.68
TPM1P09493 OR7H2P-201ENST00000513483 306 ntBASIC4.57□□□□□ -1.68
TPM1P09493 AC005798.1-201ENST00000513715 387 ntBASIC4.57□□□□□ -1.68
TPM1P09493 AC010342.1-201ENST00000514047 877 ntBASIC4.57□□□□□ -1.68
TPM1P09493 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.57□□□□□ -1.68
TPM1P09493 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.57□□□□□ -1.68
TPM1P09493 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.57□□□□□ -1.68
TPM1P09493 AC008782.1-201ENST00000603386 430 ntBASIC4.57□□□□□ -1.68
TPM1P09493 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.57□□□□□ -1.68
TPM1P09493 uc_338.32-201ENST00000615087 172 ntBASIC4.57□□□□□ -1.68
TPM1P09493 CFTRP2-201ENST00000634304 199 ntBASIC4.57□□□□□ -1.68
TPM1P09493 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TPM1P09493 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.57□□□□□ -1.68
TPM1P09493 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TPM1P09493 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TPM1P09493 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms