Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.27□□□□□ -1.41
PDGFAP04085 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.27□□□□□ -1.41
PDGFAP04085 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.27□□□□□ -1.41
PDGFAP04085 AC020914.7-201ENST00000594477 545 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AC011497.2-201ENST00000600255 639 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AC243960.4-201ENST00000600532 288 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.27□□□□□ -1.41
PDGFAP04085 AC007687.1-201ENST00000602704 304 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AC020910.2-201ENST00000603635 610 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.27□□□□□ -1.41
PDGFAP04085 AL354702.2-202ENST00000641481 890 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.27□□□□□ -1.41
PDGFAP04085 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
PDGFAP04085 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 AC062029.1-202ENST00000606164 3651 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.27□□□□□ -1.41
PDGFAP04085 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 AL645937.1-201ENST00000641739 1652 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
PDGFAP04085 ZNF806-201ENST00000438300 1774 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFAP04085 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
PDGFAP04085 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.26□□□□□ -1.41
PDGFAP04085 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
PDGFAP04085 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFAP04085 AL161781.1-201ENST00000354277 403 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 Y_RNA.431-201ENST00000384086 102 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 RNU6-332P-201ENST00000391193 108 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC016769.3-201ENST00000396562 315 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 RPL35AP24-201ENST00000413846 330 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFAP04085 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC096632.1-201ENST00000427395 310 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 ATP5JP1-201ENST00000431631 322 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 ATP5HP2-201ENST00000433885 485 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 GAPDHP59-201ENST00000435908 267 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFAP04085 COL11A2P1-205ENST00000441798 676 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFAP04085 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.26□□□□□ -1.41
PDGFAP04085 AL513533.1-201ENST00000453728 415 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 RNU6-1218P-201ENST00000458990 108 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 APOOP2-201ENST00000461561 539 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC083806.1-201ENST00000468934 316 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC011005.3-201ENST00000491624 395 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.26□□□□□ -1.41
PDGFAP04085 AC113367.2-201ENST00000505749 160 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.26□□□□□ -1.41
PDGFAP04085 AC027801.3-201ENST00000515049 698 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 RNA5SP318-201ENST00000516352 92 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.26□□□□□ -1.41
PDGFAP04085 AC105029.1-201ENST00000520250 669 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.26□□□□□ -1.41
PDGFAP04085 AP003072.2-201ENST00000527756 676 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC006512.2-201ENST00000543250 486 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFAP04085 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.26□□□□□ -1.41
PDGFAP04085 AC079075.1-201ENST00000559543 878 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.26□□□□□ -1.41
PDGFAP04085 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFAP04085 MIR3118-1-201ENST00000581787 76 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFAP04085 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.26□□□□□ -1.41
PDGFAP04085 AL353997.4-201ENST00000586196 166 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.26□□□□□ -1.41
PDGFAP04085 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.26□□□□□ -1.41
PDGFAP04085 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.26□□□□□ -1.41
PDGFAP04085 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC6.26□□□□□ -1.41
PDGFAP04085 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC091953.2-201ENST00000623979 160 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC100810.6-201ENST00000638068 285 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.26□□□□□ -1.41
PDGFAP04085 AC010325.3-201ENST00000641084 394 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 OR2L1P-202ENST00000641567 1023 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
PDGFAP04085 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFAP04085 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFAP04085 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFAP04085 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.26□□□□□ -1.41
PDGFAP04085 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AC108467.2-201ENST00000617640 1597 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 AP003175.1-201ENST00000641383 6658 ntBASIC6.26□□□□□ -1.41
PDGFAP04085 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
PDGFAP04085 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFAP04085 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
PDGFAP04085 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFAP04085 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFAP04085 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
PDGFAP04085 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFAP04085 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFAP04085 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFAP04085 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms