Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU4-40P-201ENST00000364351 143 ntBASIC4.65□□□□□ -1.67
LDLRP01130 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LDLRP01130 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.65□□□□□ -1.67
LDLRP01130 RNU6-468P-201ENST00000384003 109 ntBASIC4.65□□□□□ -1.67
LDLRP01130 RNU4-31P-201ENST00000384211 141 ntBASIC4.65□□□□□ -1.67
LDLRP01130 RNU6-1257P-201ENST00000384625 110 ntBASIC4.65□□□□□ -1.67
LDLRP01130 MIR23A-201ENST00000385245 73 ntBASIC4.65□□□□□ -1.67
LDLRP01130 MIR320B1-201ENST00000390209 79 ntBASIC4.65□□□□□ -1.67
LDLRP01130 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LDLRP01130 AC093719.1-202ENST00000392735 373 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AF228730.1-201ENST00000397972 663 ntBASIC4.65□□□□□ -1.67
LDLRP01130 HMGB3P19-201ENST00000403971 560 ntBASIC4.65□□□□□ -1.67
LDLRP01130 RN7SKP27-201ENST00000410684 333 ntBASIC4.65□□□□□ -1.67
LDLRP01130 EIF4A1P3-201ENST00000411521 244 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.65□□□□□ -1.67
LDLRP01130 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.65□□□□□ -1.67
LDLRP01130 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.65□□□□□ -1.67
LDLRP01130 VPS26BP1-201ENST00000417155 755 ntBASIC4.65□□□□□ -1.67
LDLRP01130 RGS17P1-201ENST00000423358 553 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.65□□□□□ -1.67
LDLRP01130 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.65□□□□□ -1.67
LDLRP01130 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.65□□□□□ -1.67
LDLRP01130 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.65□□□□□ -1.67
LDLRP01130 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.65□□□□□ -1.67
LDLRP01130 HMGB1P4-201ENST00000455362 567 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AC022795.1-201ENST00000473808 480 ntBASIC4.65□□□□□ -1.67
LDLRP01130 RPS17P11-201ENST00000474297 293 ntBASIC4.65□□□□□ -1.67
LDLRP01130 RN7SL817P-201ENST00000480777 288 ntBASIC4.65□□□□□ -1.67
LDLRP01130 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
LDLRP01130 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.65□□□□□ -1.67
LDLRP01130 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.65□□□□□ -1.67
LDLRP01130 IGKV1-32-201ENST00000519290 311 ntBASIC4.65□□□□□ -1.67
LDLRP01130 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.65□□□□□ -1.67
LDLRP01130 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LDLRP01130 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.65□□□□□ -1.67
LDLRP01130 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.65□□□□□ -1.67
LDLRP01130 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.65□□□□□ -1.67
LDLRP01130 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.65□□□□□ -1.67
LDLRP01130 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.65□□□□□ -1.67
LDLRP01130 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.65□□□□□ -1.67
LDLRP01130 AC091042.1-201ENST00000579213 173 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AP000919.1-202ENST00000581139 1264 ntBASIC4.65□□□□□ -1.67
LDLRP01130 RPL26P30-202ENST00000602923 645 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AC133552.5-201ENST00000604266 540 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AL121652.1-201ENST00000608851 448 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AC124016.2-201ENST00000610058 665 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AC011472.4-201ENST00000615848 491 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AL512427.1-201ENST00000618593 349 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AC093875.1-201ENST00000623688 504 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AL109659.3-201ENST00000624985 950 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AC099654.9-201ENST00000637055 678 ntBASIC4.65□□□□□ -1.67
LDLRP01130 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AC132825.7-201ENST00000638744 335 ntBASIC4.65□□□□□ -1.67
LDLRP01130 AC013437.2-201ENST00000639587 677 ntBASIC4.65□□□□□ -1.67
LDLRP01130 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.65□□□□□ -1.67
LDLRP01130 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
LDLRP01130 AC108751.5-201ENST00000492880 1336 ntBASIC4.65□□□□□ -1.67
LDLRP01130 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LDLRP01130 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LDLRP01130 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LDLRP01130 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
LDLRP01130 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.65□□□□□ -1.67
LDLRP01130 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LDLRP01130 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.64□□□□□ -1.67
LDLRP01130 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
LDLRP01130 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.64□□□□□ -1.67
LDLRP01130 CCT8P1-201ENST00000413611 1657 ntBASIC4.64□□□□□ -1.67
LDLRP01130 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LDLRP01130 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.64□□□□□ -1.67
LDLRP01130 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
LDLRP01130 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.64□□□□□ -1.67
LDLRP01130 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LDLRP01130 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LDLRP01130 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LDLRP01130 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.64□□□□□ -1.67
LDLRP01130 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.64□□□□□ -1.67
LDLRP01130 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LDLRP01130 SNORA66-201ENST00000384792 133 ntBASIC4.64□□□□□ -1.67
LDLRP01130 SNORD96B-201ENST00000386148 79 ntBASIC4.64□□□□□ -1.67
LDLRP01130 RNA5SP498-201ENST00000411342 120 ntBASIC4.64□□□□□ -1.67
LDLRP01130 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.64□□□□□ -1.67
LDLRP01130 RPL17P36-201ENST00000420302 549 ntBASIC4.64□□□□□ -1.67
LDLRP01130 MTCO1P52-201ENST00000433928 531 ntBASIC4.64□□□□□ -1.67
LDLRP01130 RHOT1P3-201ENST00000436571 331 ntBASIC4.64□□□□□ -1.67
LDLRP01130 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.64□□□□□ -1.67
LDLRP01130 MED6P1-201ENST00000439659 713 ntBASIC4.64□□□□□ -1.67
LDLRP01130 FHP1-201ENST00000442741 703 ntBASIC4.64□□□□□ -1.67
LDLRP01130 RPL7P33-201ENST00000444159 742 ntBASIC4.64□□□□□ -1.67
LDLRP01130 KNOP1P3-201ENST00000446933 426 ntBASIC4.64□□□□□ -1.67
LDLRP01130 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
LDLRP01130 RPL7P48-201ENST00000461513 746 ntBASIC4.64□□□□□ -1.67
LDLRP01130 AC063943.1-201ENST00000465434 453 ntBASIC4.64□□□□□ -1.67
LDLRP01130 AC104982.1-201ENST00000478775 574 ntBASIC4.64□□□□□ -1.67
LDLRP01130 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LDLRP01130 UBA52P3-201ENST00000491303 382 ntBASIC4.64□□□□□ -1.67
LDLRP01130 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.64□□□□□ -1.67
LDLRP01130 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.64□□□□□ -1.67
LDLRP01130 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LDLRP01130 SUMO2P5-201ENST00000506790 245 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms