Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.19□□□□□ -1.74
SHOX2O60902 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SHOX2O60902 AL590240.1-201ENST00000334118 313 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 SNORA71.2-201ENST00000364941 134 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SHOX2O60902 MT-RNR1-201ENST00000389680 954 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 CYB5AP4-201ENST00000396692 399 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.19□□□□□ -1.74
SHOX2O60902 AL139095.3-201ENST00000419672 1203 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.19□□□□□ -1.74
SHOX2O60902 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHOX2O60902 AC092809.1-201ENST00000441469 474 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.19□□□□□ -1.74
SHOX2O60902 NPM1P52-201ENST00000518264 846 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.19□□□□□ -1.74
SHOX2O60902 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.19□□□□□ -1.74
SHOX2O60902 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.19□□□□□ -1.74
SHOX2O60902 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.19□□□□□ -1.74
SHOX2O60902 AL109741.3-201ENST00000561748 592 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 AC009117.1-201ENST00000563948 554 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 OR1F2P-201ENST00000570470 933 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 MIR4480-201ENST00000582492 71 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 AC079587.1-201ENST00000603846 277 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 AL031320.1-201ENST00000604177 357 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.19□□□□□ -1.74
SHOX2O60902 AC008013.2-202ENST00000637965 364 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.19□□□□□ -1.74
SHOX2O60902 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHOX2O60902 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
SHOX2O60902 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHOX2O60902 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.19□□□□□ -1.74
SHOX2O60902 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SHOX2O60902 PRO1804-201ENST00000623780 2050 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 AC007390.2-201ENST00000606229 3803 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHOX2O60902 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SHOX2O60902 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHOX2O60902 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.18□□□□□ -1.74
SHOX2O60902 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SHOX2O60902 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHOX2O60902 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHOX2O60902 AL109941.1-201ENST00000401925 229 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 NCSTNP1-201ENST00000406229 144 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 PGBD4P8-201ENST00000412993 562 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.18□□□□□ -1.74
SHOX2O60902 RPS26P13-201ENST00000419030 330 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 EIF1P3-201ENST00000423841 334 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 AC002075.2-201ENST00000425207 252 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.18□□□□□ -1.74
SHOX2O60902 AC007559.1-201ENST00000428736 355 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.18□□□□□ -1.74
SHOX2O60902 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.18□□□□□ -1.74
SHOX2O60902 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.18□□□□□ -1.74
SHOX2O60902 AC099063.2-201ENST00000446360 662 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.18□□□□□ -1.74
SHOX2O60902 MTCO3P20-201ENST00000454926 688 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.18□□□□□ -1.74
SHOX2O60902 AC099560.2-201ENST00000457554 255 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.18□□□□□ -1.74
SHOX2O60902 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHOX2O60902 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.18□□□□□ -1.74
SHOX2O60902 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.18□□□□□ -1.74
SHOX2O60902 SOX5P1-201ENST00000524155 1127 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.18□□□□□ -1.74
SHOX2O60902 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SHOX2O60902 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.18□□□□□ -1.74
SHOX2O60902 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.18□□□□□ -1.74
SHOX2O60902 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.18□□□□□ -1.74
SHOX2O60902 AC004241.3-201ENST00000611728 517 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 MIR6853-201ENST00000619642 74 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 AC015908.5-201ENST00000623289 343 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.18□□□□□ -1.74
SHOX2O60902 LINC01808-202ENST00000641680 1116 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHOX2O60902 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SHOX2O60902 AC074029.4-201ENST00000624796 1859 ntBASIC4.18□□□□□ -1.74
SHOX2O60902 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHOX2O60902 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
SHOX2O60902 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHOX2O60902 SNORA70.2-201ENST00000364506 135 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 MIR192-201ENST00000384915 110 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 SNORA48.7-201ENST00000391302 135 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.17□□□□□ -1.74
SHOX2O60902 EIF4A1P3-201ENST00000411521 244 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.17□□□□□ -1.74
SHOX2O60902 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.17□□□□□ -1.74
SHOX2O60902 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.17□□□□□ -1.74
SHOX2O60902 COX6B1P1-201ENST00000415962 213 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.17□□□□□ -1.74
SHOX2O60902 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.17□□□□□ -1.74
SHOX2O60902 KCTD9P3-201ENST00000434597 1169 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.17□□□□□ -1.74
SHOX2O60902 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.17□□□□□ -1.74
SHOX2O60902 SKP1P1-201ENST00000438081 489 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 AC005154.2-201ENST00000438110 379 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.17□□□□□ -1.74
SHOX2O60902 AC073648.4-201ENST00000442655 781 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms