Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC092691.2-201ENST00000461787 803 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 RPL23AP37-201ENST00000479658 549 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 AP005205.1-201ENST00000563503 508 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 AC244505.7-201ENST00000599675 272 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 MIR6852-201ENST00000621699 66 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 AP005264.7-201ENST00000625003 745 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 AL512649.1-201ENST00000428997 581 ntBASIC5.05□□□□□ -1.6
RGPD3A6NKT7 KATNBL1P2-201ENST00000433311 835 ntBASIC5.05□□□□□ -1.6
RGPD3A6NKT7 AC012158.1-204ENST00000483430 465 ntBASIC5.05□□□□□ -1.6
RGPD3A6NKT7 MORF4L2P1-201ENST00000503761 858 ntBASIC5.05□□□□□ -1.6
RGPD3A6NKT7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 AC138938.1-201ENST00000515431 782 ntBASIC5.05□□□□□ -1.6
RGPD3A6NKT7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 AC124068.1-201ENST00000563131 678 ntBASIC5.05□□□□□ -1.6
RGPD3A6NKT7 MIR4325-201ENST00000583049 90 ntBASIC5.05□□□□□ -1.6
RGPD3A6NKT7 AL392088.2-201ENST00000637607 285 ntBASIC5.05□□□□□ -1.6
RGPD3A6NKT7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 AP002512.4-202ENST00000641599 4530 ntBASIC5.05□□□□□ -1.6
RGPD3A6NKT7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.05□□□□□ -1.6
RGPD3A6NKT7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 AC234772.1-201ENST00000377927 937 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 VN1R51P-201ENST00000411675 945 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 MTND2P15-201ENST00000418575 892 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 DEFB109F-201ENST00000491870 277 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 RNU6-513P-201ENST00000516104 104 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 SNORA70.17-201ENST00000516449 133 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 CDY11P-201ENST00000447168 1651 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 AC097634.1-201ENST00000604491 2467 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 RN7SKP186-201ENST00000365371 303 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 Y_RNA.510-201ENST00000384511 114 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 SNORD66.1-201ENST00000391230 76 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 CBX1P3-201ENST00000413296 527 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 FABP3P2-201ENST00000453169 399 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 AL445433.1-201ENST00000457507 257 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RGPD3A6NKT7 AL137849.1-201ENST00000604767 169 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 MIR7702-201ENST00000621931 59 ntBASIC5.04□□□□□ -1.6
RGPD3A6NKT7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
RGPD3A6NKT7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RGPD3A6NKT7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
RGPD3A6NKT7 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RGPD3A6NKT7 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RGPD3A6NKT7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RGPD3A6NKT7 AL133268.1-201ENST00000405676 1401 ntBASIC5.03□□□□□ -1.6
RGPD3A6NKT7 A2MP1-204ENST00000566278 4130 ntBASIC5.03□□□□□ -1.6
RGPD3A6NKT7 MAPK10-320ENST00000641462 6696 ntBASIC5.03□□□□□ -1.6
RGPD3A6NKT7 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RGPD3A6NKT7 MIR199A2-201ENST00000385289 110 ntBASIC5.03□□□□□ -1.6
RGPD3A6NKT7 AC073387.1-201ENST00000453261 709 ntBASIC5.03□□□□□ -1.6
RGPD3A6NKT7 AP000563.1-201ENST00000490865 758 ntBASIC5.03□□□□□ -1.6
RGPD3A6NKT7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.03□□□□□ -1.6
RGPD3A6NKT7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.03□□□□□ -1.6
RGPD3A6NKT7 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.03□□□□□ -1.6
RGPD3A6NKT7 AC063952.1-203ENST00000634410 658 ntBASIC5.03□□□□□ -1.6
RGPD3A6NKT7 AC244258.1-201ENST00000637553 1071 ntBASIC5.03□□□□□ -1.6
RGPD3A6NKT7 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RGPD3A6NKT7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
RGPD3A6NKT7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms