Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL133173.2-201ENST00000614270 90 ntBASIC5.53□□□□□ -1.52
SHISA3A0PJX4 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHISA3A0PJX4 AC241377.1-201ENST00000619797 406 ntBASIC5.53□□□□□ -1.52
SHISA3A0PJX4 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.53□□□□□ -1.52
SHISA3A0PJX4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.53□□□□□ -1.52
SHISA3A0PJX4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SHISA3A0PJX4 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.53□□□□□ -1.52
SHISA3A0PJX4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHISA3A0PJX4 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHISA3A0PJX4 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.53□□□□□ -1.52
SHISA3A0PJX4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHISA3A0PJX4 TCP11X1-202ENST00000622971 1372 ntBASIC5.53□□□□□ -1.52
SHISA3A0PJX4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHISA3A0PJX4 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHISA3A0PJX4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SHISA3A0PJX4 AL731532.1-201ENST00000623972 4236 ntBASIC5.53□□□□□ -1.52
SHISA3A0PJX4 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
SHISA3A0PJX4 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 NMD3P1-201ENST00000439704 1488 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 Y_RNA.46-201ENST00000362695 102 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 Y_RNA.431-201ENST00000384086 102 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 RNU6-952P-201ENST00000391164 108 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 RPS4XP8-201ENST00000402039 771 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AL356432.1-201ENST00000405809 419 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 TPMTP2-201ENST00000414372 726 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 MRPL50P2-201ENST00000416821 482 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 RPL12P16-201ENST00000431098 498 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AL365400.1-201ENST00000431854 640 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 RPL23AP15-201ENST00000450202 459 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 GAPDHP14-201ENST00000450472 937 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 HMGB1P4-201ENST00000455362 567 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC112187.1-201ENST00000455837 479 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 RNU6-261P-201ENST00000459506 102 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC093278.1-201ENST00000494700 600 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 RPSAP51-201ENST00000497462 645 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 TMEM251P1-201ENST00000503717 318 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 SUMO2P4-201ENST00000504193 276 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC093815.1-201ENST00000508637 280 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 EIF3KP3-201ENST00000514461 639 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 IGLVIV-64-201ENST00000518581 301 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC022616.6-201ENST00000520479 119 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 OR4C1P-201ENST00000530880 937 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AP004607.5-201ENST00000532034 217 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC008127.2-201ENST00000549925 1075 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC099489.2-201ENST00000574976 260 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 MIR5682-201ENST00000584864 76 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC027506.1-201ENST00000621395 198 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC099654.6-201ENST00000636487 512 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC000095.2-202ENST00000637415 154 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC116667.2-201ENST00000641075 823 ntBASIC5.52□□□□□ -1.53
SHISA3A0PJX4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.52□□□□□ -1.53
SHISA3A0PJX4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms