Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 PPIAP13-201ENST00000434706 478 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 MTCYBP21-201ENST00000443300 1113 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 TPMTP4-201ENST00000450749 678 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 RN7SL459P-201ENST00000481078 302 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 AC111000.3-201ENST00000508057 576 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 AC010468.3-201ENST00000508225 458 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 SNORA31.13-201ENST00000516624 135 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 AC025918.2-201ENST00000558683 763 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 HMGB2P1-201ENST00000591146 634 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 AC008745.1-201ENST00000604064 271 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 SNORD91B-202ENST00000608459 222 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 LINC00901.1-201ENST00000617252 152 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 VN2R3P-201ENST00000422626 1412 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 CPHL1P-201ENST00000461341 3407 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 SDHCP2-201ENST00000398565 501 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AL590290.1-201ENST00000405336 380 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 HMGB1P13-201ENST00000406019 642 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 FCF1P5-201ENST00000406490 482 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AP000357.1-201ENST00000409926 1165 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 FAR2P2-201ENST00000413041 594 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 XKRYP4-201ENST00000414395 483 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 LINC01347-201ENST00000417964 355 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 FAR2P4-202ENST00000425399 584 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 SEC63P1-201ENST00000425785 1258 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 RPS12P10-201ENST00000427031 377 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AL031663.1-201ENST00000437445 219 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 XKRYP5-201ENST00000449659 483 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 ATP5G1P3-201ENST00000463301 410 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AC134698.5-201ENST00000519444 336 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 DYNLL1P4-201ENST00000549314 266 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AC084757.1-201ENST00000559987 490 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 MIR4716-201ENST00000579628 84 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AP005119.2-201ENST00000579735 1105 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 ZNF92P3-201ENST00000596594 954 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 BPIFA4P-203ENST00000603168 689 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AC103792.1-201ENST00000603591 919 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AC019193.2-201ENST00000610012 634 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AL512506.1-201ENST00000613918 449 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 AC114546.3-201ENST00000623582 1734 ntBASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.28□□□□□ -1.72
ATG4BQ9Y4P1 Z98755.1-201ENST00000407015 1384 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 A2MP1-204ENST00000566278 4130 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 LINC00622-201ENST00000562811 1570 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 MTND4P31-201ENST00000425607 1343 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms