Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC091953.3-201ENST00000623220 236 ntBASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 AL049536.1-201ENST00000625043 744 ntBASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 KPNA2P2-201ENST00000419546 1489 ntBASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 MAPK10-253ENST00000641010 4072 ntBASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 AC008725.1-201ENST00000605123 2263 ntBASIC3.9□□□□□ -1.79
RHBDD3Q9Y3P4 AC068254.2-201ENST00000623938 3577 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 NXPH1-205ENST00000602349 1953 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 CPHL1P-201ENST00000461341 3407 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC067945.1-201ENST00000342609 618 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 RNA5SP52-201ENST00000362448 134 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AL160275.2-201ENST00000412010 394 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 RPS12P23-201ENST00000419579 400 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC062016.2-201ENST00000420950 676 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 RPS12P10-201ENST00000427031 377 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 RPEP2-201ENST00000432149 701 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 MTCO1P52-201ENST00000433928 531 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 RPL23AP93-201ENST00000440847 484 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 RN7SL610P-201ENST00000463845 291 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 IGLV2-34-201ENST00000490007 283 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 OR5D15P-201ENST00000531671 942 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 EIF1AXP2-201ENST00000555940 413 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC051619.2-201ENST00000559063 397 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 MIR4480-201ENST00000582492 71 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC026368.1-201ENST00000614934 690 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC139769.1-204ENST00000472297 1931 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.89□□□□□ -1.79
RHBDD3Q9Y3P4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 RNA5SP307-201ENST00000362863 116 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 SNORA58B-201ENST00000364259 136 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AL049697.2-201ENST00000403708 294 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 OR2X1P-201ENST00000421144 687 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 CENPIP1-201ENST00000425713 902 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AL160175.1-201ENST00000428124 247 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 YWHAZP2-201ENST00000440317 728 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 RPL35AP28-201ENST00000459730 331 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AC010326.1-201ENST00000462726 602 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 RPL21P71-201ENST00000465598 459 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AC092905.1-201ENST00000467527 949 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AC012170.1-201ENST00000495139 359 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 RPL30P11-201ENST00000495304 339 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 FTH1P24-201ENST00000503502 462 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms