Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 RN7SKP156-201ENST00000410308 342 ntBASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 SNORA57.3-201ENST00000411095 141 ntBASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 AL133244.1-201ENST00000456007 258 ntBASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 AC005255.1-201ENST00000593748 216 ntBASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 SNX6P1-201ENST00000601728 1224 ntBASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 AC015722.2-201ENST00000622210 551 ntBASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 AP001642.1-201ENST00000624727 2117 ntBASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC6□□□□□ -1.45
SHANK2Q9UPX8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
SHANK2Q9UPX8 AL672167.1-205ENST00000641112 3080 ntBASIC6□□□□□ -1.45
SHANK2Q9UPX8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC6□□□□□ -1.45
SHANK2Q9UPX8 VN1R8P-201ENST00000407739 893 ntBASIC6□□□□□ -1.45
SHANK2Q9UPX8 SYF2P2-201ENST00000417620 583 ntBASIC6□□□□□ -1.45
SHANK2Q9UPX8 RPL23AP89-201ENST00000439324 255 ntBASIC6□□□□□ -1.45
SHANK2Q9UPX8 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6□□□□□ -1.45
SHANK2Q9UPX8 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6□□□□□ -1.45
SHANK2Q9UPX8 RNA5SP103-201ENST00000459503 118 ntBASIC6□□□□□ -1.45
SHANK2Q9UPX8 AC008481.1-201ENST00000463278 396 ntBASIC6□□□□□ -1.45
SHANK2Q9UPX8 AC006517.1-201ENST00000480485 328 ntBASIC6□□□□□ -1.45
SHANK2Q9UPX8 AL139099.1-201ENST00000497398 403 ntBASIC6□□□□□ -1.45
SHANK2Q9UPX8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6□□□□□ -1.45
SHANK2Q9UPX8 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6□□□□□ -1.45
SHANK2Q9UPX8 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SHANK2Q9UPX8 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC6□□□□□ -1.45
SHANK2Q9UPX8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SHANK2Q9UPX8 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHANK2Q9UPX8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 AC021242.1-201ENST00000507315 2035 ntBASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 MIR199A2-201ENST00000385289 110 ntBASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 OR4K6P-201ENST00000416478 897 ntBASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 FABP3P2-201ENST00000453169 399 ntBASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 PSMC1P13-201ENST00000458195 985 ntBASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 RPS4XP12-201ENST00000461747 709 ntBASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 RPS26P28-201ENST00000470806 348 ntBASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 MIR432-201ENST00000606207 94 ntBASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 Z95327.2-201ENST00000414579 1873 ntBASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHANK2Q9UPX8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 AL356274.2-201ENST00000624379 3752 ntBASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 VDAC2P1-201ENST00000399358 958 ntBASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 AL358832.1-201ENST00000497800 389 ntBASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 AC024224.1-201ENST00000538284 609 ntBASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 CYCSP30-201ENST00000546447 172 ntBASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHANK2Q9UPX8 AC096664.2-201ENST00000411843 406 ntBASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 RPL6P9-201ENST00000466502 859 ntBASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 SETP6-201ENST00000479329 568 ntBASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 RNU6-513P-201ENST00000516104 104 ntBASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 RNA5SP179-201ENST00000517284 121 ntBASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 AC025627.2-201ENST00000576220 160 ntBASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 AC016957.2-201ENST00000616998 848 ntBASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SHANK2Q9UPX8 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.96□□□□□ -1.45
SHANK2Q9UPX8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.96□□□□□ -1.45
SHANK2Q9UPX8 Z97055.1-201ENST00000419730 712 ntBASIC5.96□□□□□ -1.45
SHANK2Q9UPX8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms