Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 DNAJC19P7-201ENST00000428811 344 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 HMGB3P5-201ENST00000428894 612 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 RPL12P28-201ENST00000430852 489 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 TPT1P13-201ENST00000449760 499 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AC107015.1-201ENST00000466902 747 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 SNORA19.3-201ENST00000516165 130 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AC122134.1-201ENST00000565664 1104 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AC124283.4-201ENST00000581815 456 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AC091178.1-203ENST00000584586 279 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AP001160.4-201ENST00000596971 382 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 CYCSP41-201ENST00000616920 296 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AL121890.2-201ENST00000617644 465 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AP005019.3-201ENST00000620418 560 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 LINC01808-202ENST00000641680 1116 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AC139769.1-204ENST00000472297 1931 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC234772.1-201ENST00000377927 937 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 RNU6-207P-201ENST00000384137 107 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 RNU6-1320P-201ENST00000390838 107 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 RNU6-298P-201ENST00000390888 96 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 RNU6-1269P-201ENST00000391139 107 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC233289.1-201ENST00000403700 508 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 MIR1271-201ENST00000408537 86 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AL356387.2-201ENST00000422272 243 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 PTP4A1P7-201ENST00000423476 514 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 NDUFA5P10-201ENST00000432147 357 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 RPS7P2-201ENST00000435134 607 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC009220.1-201ENST00000451614 275 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC012671.1-201ENST00000451912 203 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 RNU6-599P-201ENST00000459383 107 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 RNU6-1193P-201ENST00000459461 107 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 RPS17P11-201ENST00000474297 293 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 RPL21P47-201ENST00000483696 477 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 RPS27AP16-201ENST00000492222 470 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC008427.1-201ENST00000503102 655 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 C1GALT1P3-201ENST00000522049 819 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 NPM1P35-201ENST00000533043 868 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 MIR4675-201ENST00000577898 77 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 MIR4472-2-201ENST00000582069 67 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms