Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SNORA11.6-201ENST00000619030 128 ntBASIC5.26□□□□□ -1.57
SEC61A2Q9H9S3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.26□□□□□ -1.57
SEC61A2Q9H9S3 AC124864.2-201ENST00000624736 186 ntBASIC5.26□□□□□ -1.57
SEC61A2Q9H9S3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.26□□□□□ -1.57
SEC61A2Q9H9S3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.26□□□□□ -1.57
SEC61A2Q9H9S3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.26□□□□□ -1.57
SEC61A2Q9H9S3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A2Q9H9S3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SEC61A2Q9H9S3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SEC61A2Q9H9S3 CASC19-280ENST00000642102 1351 ntBASIC5.26□□□□□ -1.57
SEC61A2Q9H9S3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A2Q9H9S3 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.26□□□□□ -1.57
SEC61A2Q9H9S3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A2Q9H9S3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
SEC61A2Q9H9S3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 RNA5SP477-201ENST00000362639 119 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 RNU4-76P-201ENST00000364509 141 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 XGY1-201ENST00000381172 446 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 MIR217-201ENST00000384817 110 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 MIR16-1-201ENST00000385271 89 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 RNU6-316P-201ENST00000391027 107 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 RNU6-1300P-201ENST00000391046 108 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 PEX12P1-201ENST00000400284 1048 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 MIR1282-201ENST00000408865 101 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AIMP1P1-201ENST00000418670 937 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC092427.1-201ENST00000439177 601 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AL831737.1-201ENST00000441288 271 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AL445466.1-201ENST00000448432 357 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 DNAJB5P1-201ENST00000454004 806 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 MTND1P11-201ENST00000456661 876 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 RNU1-88P-201ENST00000459274 128 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 SNORD42A-201ENST00000459584 64 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC092865.4-201ENST00000477936 615 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC104687.1-201ENST00000485829 412 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 RPL7P24-201ENST00000493052 752 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC079382.1-201ENST00000493346 557 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC025458.1-201ENST00000506046 166 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 STMN1P2-201ENST00000508435 439 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 TOMM22P4-201ENST00000511318 336 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC114781.3-201ENST00000512083 142 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 PRMT5P1-201ENST00000514351 598 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC090616.5-202ENST00000582111 297 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC012254.3-201ENST00000591183 2117 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AL117336.2-201ENST00000602435 335 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 MIR6809-201ENST00000612189 116 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC002553.4-201ENST00000616896 331 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC024884.1-201ENST00000620583 399 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AL359697.1-201ENST00000624879 587 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 LRRC77P-213ENST00000637727 880 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AF287957.1-201ENST00000607368 1595 ntBASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.25□□□□□ -1.57
SEC61A2Q9H9S3 AC130304.1-201ENST00000622942 2385 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AL022311.1-201ENST00000623726 19416 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms