Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RNA5SP131-201ENST00000365452 119 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC136624.1-201ENST00000400791 413 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 HMGB1P20-201ENST00000402555 677 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 RNU6-920P-201ENST00000410926 92 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AL445213.1-201ENST00000412589 747 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 BMS1P17-202ENST00000416720 316 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AL022400.1-201ENST00000423946 935 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 RPL21P110-201ENST00000433345 446 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AL353706.1-201ENST00000436728 494 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC093155.1-201ENST00000440164 826 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 ARAFP2-201ENST00000440565 559 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 NDUFA12P1-201ENST00000455914 406 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 PNPLA4P1-201ENST00000458328 305 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC068724.1-201ENST00000487100 792 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 RPL32P9-201ENST00000487963 407 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AL035404.1-201ENST00000497982 568 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC112198.1-201ENST00000505369 1220 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 NDUFA5P2-201ENST00000519723 344 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 IGBP1P1-201ENST00000554337 1009 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 BPTFP1-201ENST00000579209 492 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC103881.1-201ENST00000603476 538 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AP000254.1-201ENST00000609934 520 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AL392088.2-201ENST00000637607 285 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 MTCO1P7-201ENST00000419523 1542 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 ZNF833P-201ENST00000424938 1494 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC005005.4-201ENST00000623789 16698 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC025263.3-201ENST00000622965 1396 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC011477.1-204ENST00000623416 1325 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 RNA5SP46-201ENST00000362370 120 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 RN7SKP160-201ENST00000363804 340 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 Y_RNA.619-201ENST00000410951 90 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 MTND1P27-201ENST00000451117 902 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 RPL15P21-201ENST00000495592 567 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC008494.2-201ENST00000514544 370 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 RNU6-615P-201ENST00000516065 106 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms