Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC115285.1-201ENST00000424879 736 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AL365396.1-201ENST00000430854 671 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AL049745.1-201ENST00000433953 286 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 RPS20P1-201ENST00000434853 354 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 PA2G4P6-201ENST00000438325 1197 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 RPL23AP43-201ENST00000446445 471 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 HIGD1AP8-201ENST00000453927 274 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC026348.1-201ENST00000462549 1053 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC078857.1-201ENST00000469870 667 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 RPL23AP73-201ENST00000492507 471 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC104109.1-201ENST00000498563 436 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 MTND4LP2-201ENST00000502312 285 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 HMGN1P15-201ENST00000513870 295 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC021006.3-201ENST00000530771 192 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 BGLT3-201ENST00000564523 994 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC005242.1-201ENST00000585658 438 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 BMS1P7-201ENST00000602440 1052 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC120053.1-201ENST00000607706 736 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AL121612.2-201ENST00000612261 482 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC008785.1-201ENST00000624475 456 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AL592494.2-201ENST00000425455 1548 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 MAPK10-373ENST00000641983 6772 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 LINC02471-203ENST00000641941 4752 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 MIR423-201ENST00000362201 94 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 MIR765-201ENST00000390226 114 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 PTGES3P2-201ENST00000407942 482 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 RNA5SP113-201ENST00000410486 84 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 RNU2-50P-201ENST00000410494 143 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 RBMY1KP-201ENST00000423480 476 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 RWDD4P2-201ENST00000426392 563 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 UBE2V1P3-201ENST00000439651 417 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 AL035551.1-201ENST00000446931 348 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 AC144530.1-201ENST00000452862 555 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 RN7SL585P-201ENST00000470538 280 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 AC016550.1-201ENST00000505348 785 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 RN7SKP276-201ENST00000516242 268 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 SOX5P1-201ENST00000524155 1127 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 DEFB109D-201ENST00000529497 240 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 AC090515.3-201ENST00000560431 315 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 AC093510.2-201ENST00000562820 896 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 AC016180.1-201ENST00000567945 403 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 MIR1269B-201ENST00000580405 75 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 MIR3176-201ENST00000582210 90 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 ZNF92P2-201ENST00000600543 1059 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 AC073091.2-201ENST00000603205 907 ntBASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CCDC28BQ9BUN5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms