Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RN7SKP208-201ENST00000365474 361 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 Y_RNA.424-201ENST00000384063 103 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 Y_RNA.461-201ENST00000384263 103 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 RNU6-225P-201ENST00000384613 103 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 MIR19A-201ENST00000384878 82 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC236972.1-201ENST00000433225 199 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC009237.4-201ENST00000441078 238 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC079922.1-201ENST00000443291 359 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 SNORD127-201ENST00000458892 86 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC011476.1-201ENST00000466725 307 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 RPL23P10-201ENST00000468780 412 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 RN7SL635P-201ENST00000492123 296 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 FTH1P23-201ENST00000492727 550 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC100823.2-201ENST00000518337 699 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 IGLVIV-59-201ENST00000520218 250 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AP004833.3-201ENST00000531893 322 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC092375.1-201ENST00000550410 637 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC090615.1-201ENST00000577519 154 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 RN7SL473P-201ENST00000580341 299 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC125232.2-201ENST00000592457 143 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 PART1_3.1-201ENST00000619680 131 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC091544.5-201ENST00000620192 3815 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC000123.2-201ENST00000623124 461 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USB1Q9BQ65 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USB1Q9BQ65 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USB1Q9BQ65 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
USB1Q9BQ65 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USB1Q9BQ65 OR5M2P-202ENST00000641241 4242 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC016583.1-201ENST00000624221 2431 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 HSPA8P14-201ENST00000552265 1805 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC123769.2-201ENST00000624332 5984 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USB1Q9BQ65 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.32
USB1Q9BQ65 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.77□□□□□ -1.32
USB1Q9BQ65 AC134882.1-201ENST00000603738 1676 ntBASIC6.77□□□□□ -1.32
USB1Q9BQ65 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USB1Q9BQ65 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USB1Q9BQ65 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
USB1Q9BQ65 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USB1Q9BQ65 SPATA31C2-201ENST00000324915 3777 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USB1Q9BQ65 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USB1Q9BQ65 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 RNA5SP258-201ENST00000362750 119 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 Y_RNA.60-201ENST00000362831 98 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 RNU6-511P-201ENST00000363496 107 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 SNORD115-7-201ENST00000365306 82 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 SNORD15A-201ENST00000384214 148 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 AL024474.1-201ENST00000404655 591 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 BX284632.2-201ENST00000421091 399 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 COX6CP15-201ENST00000426313 211 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 MTND5P15-201ENST00000434246 349 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 AL359955.2-201ENST00000445380 353 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 AL591379.2-201ENST00000450223 397 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 AC103987.1-201ENST00000473394 348 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 AC068305.1-201ENST00000497406 726 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms