Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 NPM1P28-201ENST00000492269 840 ntBASIC5.24□□□□□ -1.57
ABCA3Q99758 AC098799.1-201ENST00000504752 800 ntBASIC5.24□□□□□ -1.57
ABCA3Q99758 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.24□□□□□ -1.57
ABCA3Q99758 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.24□□□□□ -1.57
ABCA3Q99758 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.24□□□□□ -1.57
ABCA3Q99758 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ABCA3Q99758 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.24□□□□□ -1.57
ABCA3Q99758 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.24□□□□□ -1.57
ABCA3Q99758 AL355365.1-201ENST00000616480 294 ntBASIC5.24□□□□□ -1.57
ABCA3Q99758 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
ABCA3Q99758 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
ABCA3Q99758 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ABCA3Q99758 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.24□□□□□ -1.57
ABCA3Q99758 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCA3Q99758 AL590609.2-201ENST00000421430 368 ntBASIC5.23□□□□□ -1.57
ABCA3Q99758 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCA3Q99758 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCA3Q99758 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.23□□□□□ -1.57
ABCA3Q99758 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCA3Q99758 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.23□□□□□ -1.57
ABCA3Q99758 AC025627.2-201ENST00000576220 160 ntBASIC5.23□□□□□ -1.57
ABCA3Q99758 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.23□□□□□ -1.57
ABCA3Q99758 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ABCA3Q99758 AC090246.1-201ENST00000616499 426 ntBASIC5.23□□□□□ -1.57
ABCA3Q99758 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ABCA3Q99758 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ABCA3Q99758 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCA3Q99758 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCA3Q99758 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCA3Q99758 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCA3Q99758 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCA3Q99758 PGBD4P8-201ENST00000412993 562 ntBASIC5.23□□□□□ -1.57
ABCA3Q99758 AL158156.1-201ENST00000422509 473 ntBASIC5.23□□□□□ -1.57
ABCA3Q99758 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCA3Q99758 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.23□□□□□ -1.57
ABCA3Q99758 DEFB109A-201ENST00000482450 265 ntBASIC5.23□□□□□ -1.57
ABCA3Q99758 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.23□□□□□ -1.57
ABCA3Q99758 RPL23AP87-202ENST00000573039 466 ntBASIC5.23□□□□□ -1.57
ABCA3Q99758 AC010503.3-201ENST00000594355 540 ntBASIC5.23□□□□□ -1.57
ABCA3Q99758 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCA3Q99758 AL392088.2-201ENST00000637607 285 ntBASIC5.23□□□□□ -1.57
ABCA3Q99758 AC119674.1-207ENST00000641355 633 ntBASIC5.23□□□□□ -1.57
ABCA3Q99758 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ABCA3Q99758 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ABCA3Q99758 CDY11P-201ENST00000447168 1651 ntBASIC5.22□□□□□ -1.57
ABCA3Q99758 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.22□□□□□ -1.57
ABCA3Q99758 AP002001.2-201ENST00000529025 1469 ntBASIC5.22□□□□□ -1.57
ABCA3Q99758 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
ABCA3Q99758 VDAC1P9-201ENST00000412766 841 ntBASIC5.22□□□□□ -1.57
ABCA3Q99758 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.22□□□□□ -1.57
ABCA3Q99758 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.22□□□□□ -1.57
ABCA3Q99758 OR6C71P-201ENST00000432580 913 ntBASIC5.22□□□□□ -1.57
ABCA3Q99758 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ABCA3Q99758 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.22□□□□□ -1.57
ABCA3Q99758 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
ABCA3Q99758 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.22□□□□□ -1.57
ABCA3Q99758 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.22□□□□□ -1.57
ABCA3Q99758 AC092354.2-201ENST00000607786 514 ntBASIC5.22□□□□□ -1.57
ABCA3Q99758 AC079684.1-201ENST00000621405 437 ntBASIC5.22□□□□□ -1.57
ABCA3Q99758 AC015722.2-201ENST00000622210 551 ntBASIC5.22□□□□□ -1.57
ABCA3Q99758 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ABCA3Q99758 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
ABCA3Q99758 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
ABCA3Q99758 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.21□□□□□ -1.57
ABCA3Q99758 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
ABCA3Q99758 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
ABCA3Q99758 SNORD35B-201ENST00000363660 87 ntBASIC5.21□□□□□ -1.58
ABCA3Q99758 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.21□□□□□ -1.58
ABCA3Q99758 AL358178.1-201ENST00000407698 397 ntBASIC5.21□□□□□ -1.58
ABCA3Q99758 RPS23P10-201ENST00000416185 486 ntBASIC5.21□□□□□ -1.58
ABCA3Q99758 AL390879.2-203ENST00000426943 1121 ntBASIC5.21□□□□□ -1.58
ABCA3Q99758 AC005300.1-201ENST00000428401 373 ntBASIC5.21□□□□□ -1.58
ABCA3Q99758 AC090602.1-201ENST00000469695 252 ntBASIC5.21□□□□□ -1.58
ABCA3Q99758 SNRPCP3-201ENST00000474888 476 ntBASIC5.21□□□□□ -1.58
ABCA3Q99758 RPL23AP65-201ENST00000475608 468 ntBASIC5.21□□□□□ -1.58
ABCA3Q99758 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.21□□□□□ -1.58
ABCA3Q99758 AC138832.1-201ENST00000522871 556 ntBASIC5.21□□□□□ -1.58
ABCA3Q99758 OR5B10P-201ENST00000532869 642 ntBASIC5.21□□□□□ -1.58
ABCA3Q99758 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.21□□□□□ -1.58
ABCA3Q99758 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.21□□□□□ -1.58
ABCA3Q99758 AL731532.2-201ENST00000623542 1953 ntBASIC5.21□□□□□ -1.58
ABCA3Q99758 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ABCA3Q99758 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
ABCA3Q99758 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ABCA3Q99758 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
ABCA3Q99758 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
ABCA3Q99758 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.21□□□□□ -1.58
ABCA3Q99758 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.21□□□□□ -1.58
ABCA3Q99758 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.21□□□□□ -1.58
ABCA3Q99758 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.2□□□□□ -1.58
ABCA3Q99758 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ABCA3Q99758 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.2□□□□□ -1.58
ABCA3Q99758 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.2□□□□□ -1.58
ABCA3Q99758 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.2□□□□□ -1.58
ABCA3Q99758 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ABCA3Q99758 AL445433.1-201ENST00000457507 257 ntBASIC5.2□□□□□ -1.58
ABCA3Q99758 AC112206.1-201ENST00000468416 477 ntBASIC5.2□□□□□ -1.58
ABCA3Q99758 AL049873.1-201ENST00000480540 376 ntBASIC5.2□□□□□ -1.58
ABCA3Q99758 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.2□□□□□ -1.58
ABCA3Q99758 DEFB109D-201ENST00000529497 240 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms