Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 YWHAEP1-201ENST00000453697 763 ntBASIC7.43□□□□□ -1.22
TRIM47Q96LD4 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.43□□□□□ -1.22
TRIM47Q96LD4 AC098847.1-201ENST00000473094 348 ntBASIC7.43□□□□□ -1.22
TRIM47Q96LD4 KCTD9P5-201ENST00000504141 1170 ntBASIC7.43□□□□□ -1.22
TRIM47Q96LD4 AC112206.3-201ENST00000514578 389 ntBASIC7.43□□□□□ -1.22
TRIM47Q96LD4 Y_RNA.691-201ENST00000516611 103 ntBASIC7.43□□□□□ -1.22
TRIM47Q96LD4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 AC021733.2-201ENST00000518830 497 ntBASIC7.43□□□□□ -1.22
TRIM47Q96LD4 AC073581.1-201ENST00000519036 575 ntBASIC7.43□□□□□ -1.22
TRIM47Q96LD4 AC137768.1-201ENST00000549998 553 ntBASIC7.43□□□□□ -1.22
TRIM47Q96LD4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 AC104785.1-201ENST00000603220 588 ntBASIC7.43□□□□□ -1.22
TRIM47Q96LD4 AC073046.2-201ENST00000604756 527 ntBASIC7.43□□□□□ -1.22
TRIM47Q96LD4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 ATM-228ENST00000639240 498 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 ZNF812P-201ENST00000457674 1694 ntBASIC7.43□□□□□ -1.22
TRIM47Q96LD4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 DCAF13P3-201ENST00000561147 1334 ntBASIC7.43□□□□□ -1.22
TRIM47Q96LD4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 AC005618.1-201ENST00000606901 3148 ntBASIC7.43□□□□□ -1.22
TRIM47Q96LD4 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM47Q96LD4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC108467.2-201ENST00000617640 1597 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 MTCO1P25-201ENST00000414449 1799 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AL109755.1-201ENST00000401791 649 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 MIR548I2-201ENST00000408348 149 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 RPL5P25-201ENST00000441148 775 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 PPIAP7-201ENST00000454070 489 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AL139156.3-201ENST00000454802 394 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 MRPS17P3-201ENST00000465453 385 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 XACT-201ENST00000468762 497 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC068781.1-201ENST00000488231 618 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC007182.2-201ENST00000489251 402 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 CDH12P2-201ENST00000504393 298 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 SNORA58-201ENST00000505219 137 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC079140.5-201ENST00000507882 310 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AP000620.1-201ENST00000527147 504 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 OR4A45P-201ENST00000529954 901 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AP000889.2-201ENST00000532684 490 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC008147.3-201ENST00000548666 354 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC068305.2-201ENST00000550567 1205 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC007375.1-201ENST00000554513 578 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC008782.1-201ENST00000603386 430 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AL391646.1-201ENST00000603860 190 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC006924.1-201ENST00000610750 559 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC022467.1-201ENST00000614738 749 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AC109315.1-201ENST00000584143 1347 ntBASIC7.42□□□□□ -1.22
TRIM47Q96LD4 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.42□□□□□ -1.22
TRIM47Q96LD4 AP002370.1-201ENST00000528055 1602 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms