Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RNF31Q96EP0 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF31Q96EP0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF31Q96EP0 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF31Q96EP0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF31Q96EP0 NSRP1P1-201ENST00000444067 1693 ntBASIC5.24□□□□□ -1.57
RNF31Q96EP0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF31Q96EP0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF31Q96EP0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF31Q96EP0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF31Q96EP0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 RNA5SP507-201ENST00000363603 121 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 RN7SKP6-201ENST00000364795 319 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 MIR585-201ENST00000384887 94 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF31Q96EP0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF31Q96EP0 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 AL009179.1-201ENST00000406085 265 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 RNA5SP80-201ENST00000410475 111 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC007435.1-201ENST00000421086 415 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF31Q96EP0 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 ATP5F1P1-201ENST00000433775 569 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 GSTM5P1-201ENST00000434751 660 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 snoU13.20-201ENST00000459180 104 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 RPL7P18-201ENST00000478965 734 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 RPL7P39-201ENST00000481157 744 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 WBP1LP4-201ENST00000505043 344 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC073358.1-201ENST00000505671 684 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF31Q96EP0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC010587.2-201ENST00000511727 448 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 HNRNPKP5-201ENST00000515300 253 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 RNU6-720P-201ENST00000516363 108 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 Y_RNA.695-201ENST00000516715 107 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC060788.1-201ENST00000521318 469 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC124293.1-201ENST00000530034 493 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 MIR4436B2-201ENST00000581415 91 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 MTATP6P3-201ENST00000581686 676 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 MIR4436B1-201ENST00000583272 91 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC006272.2-201ENST00000594725 163 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 VN1R88P-201ENST00000596787 292 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC018714.1-201ENST00000605028 208 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC097505.1-201ENST00000610199 565 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC121761.2-201ENST00000617300 689 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 MIR6730-201ENST00000622213 67 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 AC006840.1-201ENST00000623069 542 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 AF001550.2-201ENST00000636643 217 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 TCP11X1-202ENST00000622971 1372 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 MTND5P24-201ENST00000438892 1767 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF31Q96EP0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF31Q96EP0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF31Q96EP0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF31Q96EP0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF31Q96EP0 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 SAMMSON-213ENST00000641336 1521 ntBASIC5.23□□□□□ -1.57
RNF31Q96EP0 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF31Q96EP0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF31Q96EP0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RNF31Q96EP0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF31Q96EP0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF31Q96EP0 AC092376.2-201ENST00000622621 4116 ntBASIC5.22□□□□□ -1.57
RNF31Q96EP0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF31Q96EP0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF31Q96EP0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF31Q96EP0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RNF31Q96EP0 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF31Q96EP0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF31Q96EP0 MT-RNR2-201ENST00000387347 1559 ntBASIC5.22□□□□□ -1.57
RNF31Q96EP0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF31Q96EP0 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF31Q96EP0 MTND4P34-201ENST00000572715 1371 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms