Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC168Q8NDH2 AC110743.1-201ENST00000584870 478 ntBASIC3.42□□□□□ -1.86
CCDC168Q8NDH2 AP002360.3-201ENST00000607673 710 ntBASIC3.42□□□□□ -1.86
CCDC168Q8NDH2 MIR8058-201ENST00000615737 89 ntBASIC3.42□□□□□ -1.86
CCDC168Q8NDH2 AC109446.4-201ENST00000623235 2755 ntBASIC3.42□□□□□ -1.86
CCDC168Q8NDH2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 U3.26-201ENST00000391236 204 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 RPL7P58-201ENST00000402913 758 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 RNU2-65P-201ENST00000410162 185 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AC021876.1-201ENST00000425959 359 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 SERPINA7P1-201ENST00000443077 631 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 RN7SL271P-201ENST00000487601 295 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AC108145.1-201ENST00000503770 153 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AC005868.1-201ENST00000536421 331 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AC015912.2-201ENST00000571053 181 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AC093671.1-201ENST00000624981 2929 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 Y_RNA.466-201ENST00000384294 113 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 SNORA3.3-201ENST00000408712 125 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AC007738.1-201ENST00000413892 348 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AL139247.1-201ENST00000422768 325 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 CYCSP53-201ENST00000455540 265 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 RPL36AP13-201ENST00000457490 317 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 AC110801.1-201ENST00000623590 212 ntBASIC3.41□□□□□ -1.86
CCDC168Q8NDH2 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC168Q8NDH2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC168Q8NDH2 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CCDC168Q8NDH2 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC168Q8NDH2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.4□□□□□ -1.86
CCDC168Q8NDH2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 AC119744.1-201ENST00000454746 1715 ntBASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 RPL23AP57-201ENST00000332361 466 ntBASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 SNORA38.1-201ENST00000364172 131 ntBASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 AL158156.1-201ENST00000422509 473 ntBASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 AL391219.1-201ENST00000422570 483 ntBASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 RANP8-201ENST00000444720 713 ntBASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 AC012158.1-204ENST00000483430 465 ntBASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 EIF4BP1-201ENST00000554881 351 ntBASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 MIR6852-201ENST00000621699 66 ntBASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC168Q8NDH2 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 AC005300.1-201ENST00000428401 373 ntBASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 UBE2V1P3-201ENST00000439651 417 ntBASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 PRDX3P3-201ENST00000447765 522 ntBASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 BTF3P6-201ENST00000448054 499 ntBASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 CYCSP35-201ENST00000451978 304 ntBASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 AC021660.1-201ENST00000465006 554 ntBASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 RPS29P19-201ENST00000479709 171 ntBASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 HMGN1P11-201ENST00000508668 303 ntBASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 RPL23AP97-201ENST00000568955 471 ntBASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 AC104984.5-201ENST00000586878 94 ntBASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 AL596275.2-208ENST00000641192 594 ntBASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 AC009229.4-201ENST00000623854 1947 ntBASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC168Q8NDH2 MIR1179-201ENST00000408703 91 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms