Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.19□□□□□ -1.58
CTR9Q6PD62 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTR9Q6PD62 MIR365B-201ENST00000362317 111 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 RNA5SP307-201ENST00000362863 116 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 MIR93-201ENST00000385024 80 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 SNORA74C-2-201ENST00000411179 201 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 TRIM60P17-201ENST00000415181 719 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTR9Q6PD62 AL356806.1-201ENST00000422524 916 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.19□□□□□ -1.58
CTR9Q6PD62 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.19□□□□□ -1.58
CTR9Q6PD62 RPL23AP25-201ENST00000430973 463 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTR9Q6PD62 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.19□□□□□ -1.58
CTR9Q6PD62 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.19□□□□□ -1.58
CTR9Q6PD62 AL353748.1-201ENST00000440753 474 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 RPL35AP15-201ENST00000468042 339 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.19□□□□□ -1.58
CTR9Q6PD62 RN7SL691P-201ENST00000494487 301 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.19□□□□□ -1.58
CTR9Q6PD62 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.19□□□□□ -1.58
CTR9Q6PD62 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.19□□□□□ -1.58
CTR9Q6PD62 AL121839.1-201ENST00000556233 1185 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 PARP1P2-201ENST00000556806 195 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.19□□□□□ -1.58
CTR9Q6PD62 AL139395.1-201ENST00000603662 160 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 MIR6716-201ENST00000613413 80 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 AC140479.6-201ENST00000633535 357 ntBASIC5.19□□□□□ -1.58
CTR9Q6PD62 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTR9Q6PD62 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTR9Q6PD62 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTR9Q6PD62 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTR9Q6PD62 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
CTR9Q6PD62 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTR9Q6PD62 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.19□□□□□ -1.58
CTR9Q6PD62 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTR9Q6PD62 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.19□□□□□ -1.58
CTR9Q6PD62 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTR9Q6PD62 AP001002.1-201ENST00000625148 1513 ntBASIC5.18□□□□□ -1.58
CTR9Q6PD62 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTR9Q6PD62 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTR9Q6PD62 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 RPL23AP26-201ENST00000412728 464 ntBASIC5.18□□□□□ -1.58
CTR9Q6PD62 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 AL590623.1-201ENST00000427864 105 ntBASIC5.18□□□□□ -1.58
CTR9Q6PD62 ACTR3P2-201ENST00000439585 1257 ntBASIC5.18□□□□□ -1.58
CTR9Q6PD62 PPIAP21-201ENST00000464473 501 ntBASIC5.18□□□□□ -1.58
CTR9Q6PD62 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 PRELID3BP5-201ENST00000508612 460 ntBASIC5.18□□□□□ -1.58
CTR9Q6PD62 SEC11B-201ENST00000518383 499 ntBASIC5.18□□□□□ -1.58
CTR9Q6PD62 VTA1P2-201ENST00000520205 911 ntBASIC5.18□□□□□ -1.58
CTR9Q6PD62 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 ARF4P1-201ENST00000605447 541 ntBASIC5.18□□□□□ -1.58
CTR9Q6PD62 AC067838.1-201ENST00000606064 577 ntBASIC5.18□□□□□ -1.58
CTR9Q6PD62 MIR7154-201ENST00000620673 73 ntBASIC5.18□□□□□ -1.58
CTR9Q6PD62 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 AC007546.2-201ENST00000623996 360 ntBASIC5.18□□□□□ -1.58
CTR9Q6PD62 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTR9Q6PD62 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTR9Q6PD62 MFSD8-242ENST00000641690 4199 ntBASIC5.18□□□□□ -1.58
CTR9Q6PD62 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 OR10AB1P-202ENST00000641219 1686 ntBASIC5.18□□□□□ -1.58
CTR9Q6PD62 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CTR9Q6PD62 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CTR9Q6PD62 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTR9Q6PD62 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTR9Q6PD62 AC011155.1-201ENST00000316512 456 ntBASIC5.17□□□□□ -1.58
CTR9Q6PD62 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
CTR9Q6PD62 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTR9Q6PD62 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTR9Q6PD62 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.17□□□□□ -1.58
CTR9Q6PD62 PPIAP13-201ENST00000434706 478 ntBASIC5.17□□□□□ -1.58
CTR9Q6PD62 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.17□□□□□ -1.58
CTR9Q6PD62 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.17□□□□□ -1.58
CTR9Q6PD62 NUTF2P3-201ENST00000448540 384 ntBASIC5.17□□□□□ -1.58
CTR9Q6PD62 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.17□□□□□ -1.58
CTR9Q6PD62 RPS26P28-201ENST00000470806 348 ntBASIC5.17□□□□□ -1.58
CTR9Q6PD62 AC105137.1-201ENST00000484355 562 ntBASIC5.17□□□□□ -1.58
CTR9Q6PD62 AC090013.1-201ENST00000485147 480 ntBASIC5.17□□□□□ -1.58
CTR9Q6PD62 RN7SL812P-201ENST00000493791 279 ntBASIC5.17□□□□□ -1.58
CTR9Q6PD62 snoU109.6-201ENST00000516831 118 ntBASIC5.17□□□□□ -1.58
CTR9Q6PD62 IGKV2D-10-201ENST00000520194 281 ntBASIC5.17□□□□□ -1.58
CTR9Q6PD62 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTR9Q6PD62 AC012414.2-201ENST00000559474 187 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms