Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC58Q4VC31 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC58Q4VC31 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC58Q4VC31 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC58Q4VC31 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC58Q4VC31 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.76□□□□□ -1.81
CCDC58Q4VC31 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC132825.1-201ENST00000463573 2247 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AP000357.1-201ENST00000409926 1165 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 ARF4P2-201ENST00000430209 526 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AL359265.2-201ENST00000434367 631 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AL353093.1-201ENST00000441292 436 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 RPL23AP81-201ENST00000455252 467 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 CFTRP1-201ENST00000456646 183 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 RPL7P48-201ENST00000461513 746 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC004815.1-201ENST00000484185 331 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC010374.1-201ENST00000503762 1237 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC021146.1-201ENST00000511202 716 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC110775.1-201ENST00000513721 462 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 IGLV2-28-201ENST00000520681 304 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AP001781.1-201ENST00000530977 207 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC027176.2-201ENST00000559166 746 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 RN7SL690P-201ENST00000582087 240 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AC012531.5-201ENST00000611375 151 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AP005019.3-201ENST00000620418 560 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 AP005264.7-201ENST00000625003 745 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 MFSD8-216ENST00000641147 4009 ntBASIC3.75□□□□□ -1.81
CCDC58Q4VC31 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC58Q4VC31 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 USP8P1-201ENST00000494673 3183 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 PRO1804-201ENST00000623780 2050 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 U1.1-201ENST00000384101 164 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 AL049697.2-201ENST00000403708 294 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 SNORA11F-201ENST00000408237 128 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 AC073648.4-201ENST00000442655 781 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 AL512326.1-201ENST00000443050 721 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 AC110749.1-201ENST00000462007 357 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 AP000676.2-201ENST00000529711 301 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 PDCL2P2-201ENST00000533651 189 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 MIR4458-201ENST00000578872 75 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 AC069061.3-201ENST00000582254 823 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 AL592436.1-201ENST00000605135 558 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 AP003392.5-201ENST00000607857 415 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 AC116651.1-201ENST00000609724 556 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 MIR6826-201ENST00000617808 98 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 AC068870.2-201ENST00000620635 389 ntBASIC3.74□□□□□ -1.81
CCDC58Q4VC31 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CCDC58Q4VC31 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms