Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.92□□□□□ -1.62
GABPAQ06546 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.92□□□□□ -1.62
GABPAQ06546 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
GABPAQ06546 OR11H4-201ENST00000315409 1082 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 RNU6-1251P-201ENST00000364502 107 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.92□□□□□ -1.62
GABPAQ06546 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.92□□□□□ -1.62
GABPAQ06546 MIR137-201ENST00000385223 102 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
GABPAQ06546 AL589655.1-201ENST00000405398 482 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 RPL21P65-201ENST00000406094 466 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 MIR1179-201ENST00000408703 91 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 AC009237.10-201ENST00000414112 510 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 AC108032.1-201ENST00000416706 207 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.92□□□□□ -1.62
GABPAQ06546 RBMY1KP-201ENST00000423480 476 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.92□□□□□ -1.62
GABPAQ06546 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.92□□□□□ -1.62
GABPAQ06546 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.92□□□□□ -1.62
GABPAQ06546 TPT1P3-201ENST00000492841 512 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.92□□□□□ -1.62
GABPAQ06546 FTH1P21-201ENST00000512179 511 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.92□□□□□ -1.62
GABPAQ06546 PHBP17-201ENST00000528576 541 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.92□□□□□ -1.62
GABPAQ06546 AL358913.1-201ENST00000554342 121 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.92□□□□□ -1.62
GABPAQ06546 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.92□□□□□ -1.62
GABPAQ06546 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.92□□□□□ -1.62
GABPAQ06546 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.92□□□□□ -1.62
GABPAQ06546 FAM106CP-201ENST00000582212 507 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 AP005262.1-201ENST00000582646 997 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 AC022916.3-201ENST00000592961 742 ntBASIC4.92□□□□□ -1.62
GABPAQ06546 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.92□□□□□ -1.62
GABPAQ06546 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
GABPAQ06546 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
GABPAQ06546 PCAT14-202ENST00000627127 3935 ntBASIC4.91□□□□□ -1.62
GABPAQ06546 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GABPAQ06546 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.91□□□□□ -1.62
GABPAQ06546 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.91□□□□□ -1.62
GABPAQ06546 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GABPAQ06546 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GABPAQ06546 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GABPAQ06546 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.91□□□□□ -1.62
GABPAQ06546 MIR134-201ENST00000385258 73 ntBASIC4.91□□□□□ -1.62
GABPAQ06546 AL512504.1-201ENST00000415494 778 ntBASIC4.91□□□□□ -1.62
GABPAQ06546 AC004448.2-201ENST00000422360 586 ntBASIC4.91□□□□□ -1.62
GABPAQ06546 AL158073.1-201ENST00000426848 1104 ntBASIC4.91□□□□□ -1.62
GABPAQ06546 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.91□□□□□ -1.62
GABPAQ06546 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.91□□□□□ -1.62
GABPAQ06546 AL162151.2-201ENST00000448875 158 ntBASIC4.91□□□□□ -1.62
GABPAQ06546 RN7SL817P-201ENST00000480777 288 ntBASIC4.91□□□□□ -1.62
GABPAQ06546 DEFB109F-201ENST00000491870 277 ntBASIC4.91□□□□□ -1.62
GABPAQ06546 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.91□□□□□ -1.62
GABPAQ06546 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.91□□□□□ -1.62
GABPAQ06546 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.91□□□□□ -1.62
GABPAQ06546 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.91□□□□□ -1.62
GABPAQ06546 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.91□□□□□ -1.62
GABPAQ06546 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.91□□□□□ -1.62
GABPAQ06546 AC027176.2-201ENST00000559166 746 ntBASIC4.91□□□□□ -1.62
GABPAQ06546 AC092868.3-201ENST00000560515 784 ntBASIC4.91□□□□□ -1.62
GABPAQ06546 RN7SL703P-201ENST00000578485 302 ntBASIC4.91□□□□□ -1.62
GABPAQ06546 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.91□□□□□ -1.62
GABPAQ06546 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.91□□□□□ -1.62
GABPAQ06546 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.91□□□□□ -1.62
GABPAQ06546 AC099676.1-201ENST00000608886 657 ntBASIC4.91□□□□□ -1.62
GABPAQ06546 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GABPAQ06546 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.91□□□□□ -1.62
GABPAQ06546 AC116667.1-201ENST00000604855 2072 ntBASIC4.91□□□□□ -1.62
GABPAQ06546 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GABPAQ06546 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GABPAQ06546 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GABPAQ06546 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
GABPAQ06546 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GABPAQ06546 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.9□□□□□ -1.62
GABPAQ06546 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
GABPAQ06546 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GABPAQ06546 MIR421-201ENST00000365696 85 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 RNU6-1320P-201ENST00000390838 107 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 SNORD65-201ENST00000391079 73 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 RNU6-1269P-201ENST00000391139 107 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 AP000357.1-201ENST00000409926 1165 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 SETP15-201ENST00000412724 337 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.9□□□□□ -1.63
GABPAQ06546 CEACAMP8-201ENST00000413902 580 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 AL161631.1-201ENST00000417933 486 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 RPL36AP36-201ENST00000418616 301 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 MTCYBP7-201ENST00000419540 1134 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 SETP10-201ENST00000424368 814 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.9□□□□□ -1.63
GABPAQ06546 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.9□□□□□ -1.63
GABPAQ06546 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.9□□□□□ -1.63
GABPAQ06546 RPL23AP46-201ENST00000438548 490 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 AC006011.1-201ENST00000442758 349 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 AL157884.3-201ENST00000448273 1184 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.9□□□□□ -1.63
GABPAQ06546 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.9□□□□□ -1.63
GABPAQ06546 RNU6-599P-201ENST00000459383 107 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 RNU6-1193P-201ENST00000459461 107 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms