Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AP003168.1-201ENST00000530091 307 ntBASIC4.08□□□□□ -1.76
LIM2P55344 TRAV8-5-201ENST00000537369 341 ntBASIC4.08□□□□□ -1.76
LIM2P55344 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.08□□□□□ -1.76
LIM2P55344 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
LIM2P55344 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.08□□□□□ -1.76
LIM2P55344 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.08□□□□□ -1.76
LIM2P55344 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.08□□□□□ -1.76
LIM2P55344 AL121890.3-201ENST00000618494 516 ntBASIC4.08□□□□□ -1.76
LIM2P55344 AC019278.1-201ENST00000623516 479 ntBASIC4.08□□□□□ -1.76
LIM2P55344 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LIM2P55344 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LIM2P55344 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LIM2P55344 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LIM2P55344 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LIM2P55344 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
LIM2P55344 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
LIM2P55344 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.07□□□□□ -1.76
LIM2P55344 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LIM2P55344 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LIM2P55344 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LIM2P55344 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.07□□□□□ -1.76
LIM2P55344 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.07□□□□□ -1.76
LIM2P55344 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LIM2P55344 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.07□□□□□ -1.76
LIM2P55344 AC010300.1-201ENST00000600671 5134 ntBASIC4.07□□□□□ -1.76
LIM2P55344 RAD1P1-201ENST00000231383 813 ntBASIC4.07□□□□□ -1.76
LIM2P55344 MIR320B1-201ENST00000390209 79 ntBASIC4.07□□□□□ -1.76
LIM2P55344 VDAC2P1-201ENST00000399358 958 ntBASIC4.07□□□□□ -1.76
LIM2P55344 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.07□□□□□ -1.76
LIM2P55344 FAR2P2-201ENST00000413041 594 ntBASIC4.07□□□□□ -1.76
LIM2P55344 NRBF2P2-201ENST00000413087 861 ntBASIC4.07□□□□□ -1.76
LIM2P55344 AC011933.1-201ENST00000413334 321 ntBASIC4.07□□□□□ -1.76
LIM2P55344 OR2X1P-201ENST00000421144 687 ntBASIC4.07□□□□□ -1.76
LIM2P55344 FAR2P4-202ENST00000425399 584 ntBASIC4.07□□□□□ -1.76
LIM2P55344 RPL18P10-201ENST00000425606 538 ntBASIC4.07□□□□□ -1.76
LIM2P55344 AL157831.1-201ENST00000426134 473 ntBASIC4.07□□□□□ -1.76
LIM2P55344 PRELID3BP10-201ENST00000431957 584 ntBASIC4.07□□□□□ -1.76
LIM2P55344 AL512326.1-201ENST00000443050 721 ntBASIC4.07□□□□□ -1.76
LIM2P55344 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.07□□□□□ -1.76
LIM2P55344 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.07□□□□□ -1.76
LIM2P55344 ABCF2P2-201ENST00000450549 296 ntBASIC4.07□□□□□ -1.76
LIM2P55344 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.07□□□□□ -1.76
LIM2P55344 AC116533.1-201ENST00000459748 321 ntBASIC4.07□□□□□ -1.76
LIM2P55344 AC089999.1-201ENST00000460336 374 ntBASIC4.07□□□□□ -1.76
LIM2P55344 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.07□□□□□ -1.76
LIM2P55344 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.07□□□□□ -1.76
LIM2P55344 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.07□□□□□ -1.76
LIM2P55344 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.07□□□□□ -1.76
LIM2P55344 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.07□□□□□ -1.76
LIM2P55344 PHBP17-201ENST00000528576 541 ntBASIC4.07□□□□□ -1.76
LIM2P55344 AL109766.1-201ENST00000555080 552 ntBASIC4.07□□□□□ -1.76
LIM2P55344 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.07□□□□□ -1.76
LIM2P55344 MIR4284-201ENST00000578924 81 ntBASIC4.07□□□□□ -1.76
LIM2P55344 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.07□□□□□ -1.76
LIM2P55344 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.07□□□□□ -1.76
LIM2P55344 AC119501.1-201ENST00000603646 475 ntBASIC4.07□□□□□ -1.76
LIM2P55344 AL031666.3-201ENST00000609320 1006 ntBASIC4.07□□□□□ -1.76
LIM2P55344 AC011472.4-201ENST00000615848 491 ntBASIC4.07□□□□□ -1.76
LIM2P55344 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.07□□□□□ -1.76
LIM2P55344 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.07□□□□□ -1.76
LIM2P55344 AP003497.2-201ENST00000624220 967 ntBASIC4.07□□□□□ -1.76
LIM2P55344 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LIM2P55344 LINC01109-201ENST00000603837 3081 ntBASIC4.07□□□□□ -1.76
LIM2P55344 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
LIM2P55344 AL158163.1-201ENST00000603915 1649 ntBASIC4.06□□□□□ -1.76
LIM2P55344 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LIM2P55344 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
LIM2P55344 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.06□□□□□ -1.76
LIM2P55344 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
LIM2P55344 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
LIM2P55344 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
LIM2P55344 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LIM2P55344 RNU6-666P-201ENST00000363499 107 ntBASIC4.06□□□□□ -1.76
LIM2P55344 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
LIM2P55344 UBE2V1P15-201ENST00000407776 448 ntBASIC4.06□□□□□ -1.76
LIM2P55344 RNU4-25P-201ENST00000410569 230 ntBASIC4.06□□□□□ -1.76
LIM2P55344 RNU4-74P-201ENST00000411280 161 ntBASIC4.06□□□□□ -1.76
LIM2P55344 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.06□□□□□ -1.76
LIM2P55344 MTATP6P19-201ENST00000413797 659 ntBASIC4.06□□□□□ -1.76
LIM2P55344 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.06□□□□□ -1.76
LIM2P55344 AC073464.3-201ENST00000422564 712 ntBASIC4.06□□□□□ -1.76
LIM2P55344 AC007000.2-201ENST00000442564 487 ntBASIC4.06□□□□□ -1.76
LIM2P55344 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.06□□□□□ -1.76
LIM2P55344 RN7SL303P-201ENST00000469773 251 ntBASIC4.06□□□□□ -1.76
LIM2P55344 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
LIM2P55344 RN7SL481P-201ENST00000477764 299 ntBASIC4.06□□□□□ -1.76
LIM2P55344 AC093890.1-201ENST00000502554 540 ntBASIC4.06□□□□□ -1.76
LIM2P55344 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.06□□□□□ -1.76
LIM2P55344 SETP12-201ENST00000514068 805 ntBASIC4.06□□□□□ -1.76
LIM2P55344 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.06□□□□□ -1.76
LIM2P55344 OR8K2P-201ENST00000524645 927 ntBASIC4.06□□□□□ -1.76
LIM2P55344 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.06□□□□□ -1.76
LIM2P55344 AC006064.5-201ENST00000541782 248 ntBASIC4.06□□□□□ -1.76
LIM2P55344 AC069240.1-201ENST00000548774 375 ntBASIC4.06□□□□□ -1.76
LIM2P55344 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.06□□□□□ -1.76
LIM2P55344 AC027176.2-201ENST00000559166 746 ntBASIC4.06□□□□□ -1.76
LIM2P55344 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.06□□□□□ -1.76
LIM2P55344 CYP4A43P-201ENST00000568156 121 ntBASIC4.06□□□□□ -1.76
LIM2P55344 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.06□□□□□ -1.76
LIM2P55344 AC005242.1-201ENST00000585658 438 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms