Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RGS17P1-201ENST00000423358 553 ntBASIC4.53□□□□□ -1.68
PDX1P52945 RPL34P6-201ENST00000432390 345 ntBASIC4.53□□□□□ -1.68
PDX1P52945 NPM1P33-201ENST00000438918 872 ntBASIC4.53□□□□□ -1.68
PDX1P52945 YWHAZP2-201ENST00000440317 728 ntBASIC4.53□□□□□ -1.68
PDX1P52945 RHEBP2-201ENST00000450289 600 ntBASIC4.53□□□□□ -1.68
PDX1P52945 RPL7AP52-201ENST00000458096 790 ntBASIC4.53□□□□□ -1.68
PDX1P52945 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.53□□□□□ -1.68
PDX1P52945 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.53□□□□□ -1.68
PDX1P52945 AC011276.1-201ENST00000469688 323 ntBASIC4.53□□□□□ -1.68
PDX1P52945 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.53□□□□□ -1.68
PDX1P52945 HMGB1P38-201ENST00000490557 577 ntBASIC4.53□□□□□ -1.68
PDX1P52945 MTND4LP2-201ENST00000502312 285 ntBASIC4.53□□□□□ -1.68
PDX1P52945 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.53□□□□□ -1.68
PDX1P52945 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PDX1P52945 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.53□□□□□ -1.68
PDX1P52945 AC108471.1-201ENST00000513977 287 ntBASIC4.53□□□□□ -1.68
PDX1P52945 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.53□□□□□ -1.68
PDX1P52945 RNU6-415P-201ENST00000516252 97 ntBASIC4.53□□□□□ -1.68
PDX1P52945 AC010476.1-201ENST00000519111 851 ntBASIC4.53□□□□□ -1.68
PDX1P52945 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.53□□□□□ -1.68
PDX1P52945 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.53□□□□□ -1.68
PDX1P52945 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.53□□□□□ -1.68
PDX1P52945 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDX1P52945 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.53□□□□□ -1.68
PDX1P52945 AC023575.1-201ENST00000580510 358 ntBASIC4.53□□□□□ -1.68
PDX1P52945 SNORA74C-1-201ENST00000580726 201 ntBASIC4.53□□□□□ -1.68
PDX1P52945 AC011492.1-201ENST00000600023 315 ntBASIC4.53□□□□□ -1.68
PDX1P52945 AC112503.1-201ENST00000608436 391 ntBASIC4.53□□□□□ -1.68
PDX1P52945 AL121890.3-201ENST00000618494 516 ntBASIC4.53□□□□□ -1.68
PDX1P52945 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.53□□□□□ -1.68
PDX1P52945 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.53□□□□□ -1.68
PDX1P52945 AC004232.3-201ENST00000622977 525 ntBASIC4.53□□□□□ -1.68
PDX1P52945 AC024023.1-201ENST00000624530 922 ntBASIC4.53□□□□□ -1.68
PDX1P52945 AP001642.1-201ENST00000624727 2117 ntBASIC4.53□□□□□ -1.68
PDX1P52945 AC010608.3-201ENST00000625048 527 ntBASIC4.53□□□□□ -1.68
PDX1P52945 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.53□□□□□ -1.68
PDX1P52945 AC083865.1-201ENST00000636634 831 ntBASIC4.53□□□□□ -1.68
PDX1P52945 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.53□□□□□ -1.68
PDX1P52945 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDX1P52945 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PDX1P52945 RAD17P1-201ENST00000418130 2042 ntBASIC4.53□□□□□ -1.68
PDX1P52945 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.53□□□□□ -1.68
PDX1P52945 A2MP1-204ENST00000566278 4130 ntBASIC4.53□□□□□ -1.69
PDX1P52945 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDX1P52945 HSPD1P11-201ENST00000508643 1702 ntBASIC4.52□□□□□ -1.69
PDX1P52945 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDX1P52945 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.52□□□□□ -1.69
PDX1P52945 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDX1P52945 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDX1P52945 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDX1P52945 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.52□□□□□ -1.69
PDX1P52945 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.52□□□□□ -1.69
PDX1P52945 AC093311.1-201ENST00000506586 2021 ntBASIC4.52□□□□□ -1.69
PDX1P52945 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDX1P52945 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDX1P52945 AC008549.2-201ENST00000333482 706 ntBASIC4.52□□□□□ -1.69
PDX1P52945 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.52□□□□□ -1.69
PDX1P52945 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PDX1P52945 AL355615.1-201ENST00000406187 641 ntBASIC4.52□□□□□ -1.69
PDX1P52945 UBE2V1P11-201ENST00000411559 285 ntBASIC4.52□□□□□ -1.69
PDX1P52945 AL591848.1-201ENST00000413092 322 ntBASIC4.52□□□□□ -1.69
PDX1P52945 EIF4HP2-201ENST00000424380 563 ntBASIC4.52□□□□□ -1.69
PDX1P52945 CKS1BP6-201ENST00000424932 240 ntBASIC4.52□□□□□ -1.69
PDX1P52945 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.52□□□□□ -1.69
PDX1P52945 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.52□□□□□ -1.69
PDX1P52945 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.52□□□□□ -1.69
PDX1P52945 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.52□□□□□ -1.69
PDX1P52945 RPL34P26-201ENST00000445636 354 ntBASIC4.52□□□□□ -1.69
PDX1P52945 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.52□□□□□ -1.69
PDX1P52945 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.52□□□□□ -1.69
PDX1P52945 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.52□□□□□ -1.69
PDX1P52945 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.52□□□□□ -1.69
PDX1P52945 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDX1P52945 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.52□□□□□ -1.69
PDX1P52945 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDX1P52945 Y_RNA.719-201ENST00000517156 106 ntBASIC4.52□□□□□ -1.69
PDX1P52945 RNU6-709P-201ENST00000517257 104 ntBASIC4.52□□□□□ -1.69
PDX1P52945 OR8G5-201ENST00000524943 1041 ntBASIC4.52□□□□□ -1.69
PDX1P52945 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.52□□□□□ -1.69
PDX1P52945 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.52□□□□□ -1.69
PDX1P52945 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.52□□□□□ -1.69
PDX1P52945 NPM1P47-201ENST00000560843 856 ntBASIC4.52□□□□□ -1.69
PDX1P52945 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDX1P52945 RN7SL652P-201ENST00000577769 300 ntBASIC4.52□□□□□ -1.69
PDX1P52945 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.52□□□□□ -1.69
PDX1P52945 AC069366.1-201ENST00000583159 838 ntBASIC4.52□□□□□ -1.69
PDX1P52945 AC008507.2-201ENST00000588402 1176 ntBASIC4.52□□□□□ -1.69
PDX1P52945 AC245884.10-201ENST00000597355 337 ntBASIC4.52□□□□□ -1.69
PDX1P52945 AC023762.1-201ENST00000603280 584 ntBASIC4.52□□□□□ -1.69
PDX1P52945 AC115286.1-201ENST00000604298 434 ntBASIC4.52□□□□□ -1.69
PDX1P52945 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.52□□□□□ -1.69
PDX1P52945 MIR6716-201ENST00000613413 80 ntBASIC4.52□□□□□ -1.69
PDX1P52945 AC074140.1-201ENST00000621617 208 ntBASIC4.52□□□□□ -1.69
PDX1P52945 AC011944.2-201ENST00000624440 683 ntBASIC4.52□□□□□ -1.69
PDX1P52945 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.52□□□□□ -1.69
PDX1P52945 TMEM30CP-203ENST00000637814 1035 ntBASIC4.52□□□□□ -1.69
PDX1P52945 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDX1P52945 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDX1P52945 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.52□□□□□ -1.69
PDX1P52945 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms