Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL592293.2-201ENST00000422292 996 ntBASIC4.15□□□□□ -1.75
RPA3P35244 AL157831.1-201ENST00000426134 473 ntBASIC4.15□□□□□ -1.75
RPA3P35244 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.15□□□□□ -1.75
RPA3P35244 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.15□□□□□ -1.75
RPA3P35244 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.15□□□□□ -1.75
RPA3P35244 ACTR3P2-201ENST00000439585 1257 ntBASIC4.15□□□□□ -1.75
RPA3P35244 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.15□□□□□ -1.75
RPA3P35244 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RPA3P35244 CCDC75P1-201ENST00000469247 791 ntBASIC4.15□□□□□ -1.75
RPA3P35244 RPL35P6-201ENST00000490024 372 ntBASIC4.15□□□□□ -1.75
RPA3P35244 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
RPA3P35244 HPRT1P2-201ENST00000505250 544 ntBASIC4.15□□□□□ -1.75
RPA3P35244 AC106806.2-201ENST00000509365 500 ntBASIC4.15□□□□□ -1.75
RPA3P35244 VWA8P1-201ENST00000510889 176 ntBASIC4.15□□□□□ -1.75
RPA3P35244 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.15□□□□□ -1.75
RPA3P35244 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.15□□□□□ -1.75
RPA3P35244 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RPA3P35244 PSMB7P1-201ENST00000556349 514 ntBASIC4.15□□□□□ -1.75
RPA3P35244 TVP23BP1-201ENST00000557500 617 ntBASIC4.15□□□□□ -1.75
RPA3P35244 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.15□□□□□ -1.75
RPA3P35244 AC079171.1-201ENST00000568788 914 ntBASIC4.15□□□□□ -1.75
RPA3P35244 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.15□□□□□ -1.75
RPA3P35244 AF230666.2-201ENST00000602328 725 ntBASIC4.15□□□□□ -1.75
RPA3P35244 AL023583.1-201ENST00000607518 1143 ntBASIC4.15□□□□□ -1.75
RPA3P35244 AL445363.3-201ENST00000623080 671 ntBASIC4.15□□□□□ -1.75
RPA3P35244 AC067931.1-201ENST00000624190 671 ntBASIC4.15□□□□□ -1.75
RPA3P35244 AC011944.2-201ENST00000624440 683 ntBASIC4.15□□□□□ -1.75
RPA3P35244 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.15□□□□□ -1.75
RPA3P35244 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.15□□□□□ -1.75
RPA3P35244 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
RPA3P35244 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RPA3P35244 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.15□□□□□ -1.75
RPA3P35244 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RPA3P35244 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
RPA3P35244 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RPA3P35244 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RPA3P35244 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RPA3P35244 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RPA3P35244 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RPA3P35244 Z82217.1-201ENST00000625157 8149 ntBASIC4.14□□□□□ -1.75
RPA3P35244 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RPA3P35244 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RPA3P35244 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RPA3P35244 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.14□□□□□ -1.75
RPA3P35244 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.14□□□□□ -1.75
RPA3P35244 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RPA3P35244 AC027287.1-201ENST00000553115 1453 ntBASIC4.14□□□□□ -1.75
RPA3P35244 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RPA3P35244 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RPA3P35244 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RPA3P35244 RNA5SP36-201ENST00000410197 133 ntBASIC4.14□□□□□ -1.75
RPA3P35244 PGBD4P8-201ENST00000412993 562 ntBASIC4.14□□□□□ -1.75
RPA3P35244 NRBF2P2-201ENST00000413087 861 ntBASIC4.14□□□□□ -1.75
RPA3P35244 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.14□□□□□ -1.75
RPA3P35244 AC087650.1-201ENST00000431445 468 ntBASIC4.14□□□□□ -1.75
RPA3P35244 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.14□□□□□ -1.75
RPA3P35244 VN1R25P-201ENST00000443385 738 ntBASIC4.14□□□□□ -1.75
RPA3P35244 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RPA3P35244 YWHAQP9-201ENST00000445891 512 ntBASIC4.14□□□□□ -1.75
RPA3P35244 EEF1A1P1-201ENST00000447052 739 ntBASIC4.14□□□□□ -1.75
RPA3P35244 RPL10P17-201ENST00000453852 316 ntBASIC4.14□□□□□ -1.75
RPA3P35244 VN1R40P-201ENST00000455196 941 ntBASIC4.14□□□□□ -1.75
RPA3P35244 NDUFA5P9-201ENST00000472609 340 ntBASIC4.14□□□□□ -1.75
RPA3P35244 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.14□□□□□ -1.75
RPA3P35244 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.14□□□□□ -1.75
RPA3P35244 AL592156.1-201ENST00000508758 304 ntBASIC4.14□□□□□ -1.75
RPA3P35244 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.14□□□□□ -1.75
RPA3P35244 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.14□□□□□ -1.75
RPA3P35244 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.14□□□□□ -1.75
RPA3P35244 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.14□□□□□ -1.75
RPA3P35244 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.14□□□□□ -1.75
RPA3P35244 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.14□□□□□ -1.75
RPA3P35244 IPO5P1-202ENST00000600039 287 ntBASIC4.14□□□□□ -1.75
RPA3P35244 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.14□□□□□ -1.75
RPA3P35244 AC104662.1-201ENST00000604448 511 ntBASIC4.14□□□□□ -1.75
RPA3P35244 AP003392.5-201ENST00000607857 415 ntBASIC4.14□□□□□ -1.75
RPA3P35244 AP000255.1-201ENST00000610276 676 ntBASIC4.14□□□□□ -1.75
RPA3P35244 AP000843.1-201ENST00000624880 701 ntBASIC4.14□□□□□ -1.75
RPA3P35244 AP005264.7-201ENST00000625003 745 ntBASIC4.14□□□□□ -1.75
RPA3P35244 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
RPA3P35244 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RPA3P35244 BDP1P-201ENST00000582658 1990 ntBASIC4.14□□□□□ -1.75
RPA3P35244 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RPA3P35244 AC083899.2-201ENST00000423285 1376 ntBASIC4.14□□□□□ -1.75
RPA3P35244 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPA3P35244 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPA3P35244 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.13□□□□□ -1.75
RPA3P35244 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.13□□□□□ -1.75
RPA3P35244 AL590609.2-201ENST00000421430 368 ntBASIC4.13□□□□□ -1.75
RPA3P35244 RPS12P5-201ENST00000423449 371 ntBASIC4.13□□□□□ -1.75
RPA3P35244 AC016712.1-201ENST00000431088 378 ntBASIC4.13□□□□□ -1.75
RPA3P35244 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.13□□□□□ -1.75
RPA3P35244 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.13□□□□□ -1.75
RPA3P35244 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPA3P35244 H2AFZP6-201ENST00000444403 394 ntBASIC4.13□□□□□ -1.75
RPA3P35244 HMGB1P16-201ENST00000447155 540 ntBASIC4.13□□□□□ -1.75
RPA3P35244 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.13□□□□□ -1.75
RPA3P35244 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.13□□□□□ -1.75
RPA3P35244 AC037198.2-201ENST00000478845 733 ntBASIC4.13□□□□□ -1.75
RPA3P35244 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms