Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 CYP4A43P-201ENST00000568156 121 ntBASIC4.21□□□□□ -1.74
SHMT2P34897 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.21□□□□□ -1.74
SHMT2P34897 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.21□□□□□ -1.74
SHMT2P34897 AC090312.1-201ENST00000580637 348 ntBASIC4.21□□□□□ -1.74
SHMT2P34897 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.21□□□□□ -1.74
SHMT2P34897 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.21□□□□□ -1.74
SHMT2P34897 HMGB1P51-201ENST00000605166 638 ntBASIC4.21□□□□□ -1.74
SHMT2P34897 AC011944.2-201ENST00000624440 683 ntBASIC4.21□□□□□ -1.74
SHMT2P34897 FP325313.1-201ENST00000638228 703 ntBASIC4.21□□□□□ -1.74
SHMT2P34897 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.21□□□□□ -1.74
SHMT2P34897 AL139254.3-201ENST00000641097 674 ntBASIC4.21□□□□□ -1.74
SHMT2P34897 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SHMT2P34897 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHMT2P34897 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.21□□□□□ -1.74
SHMT2P34897 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.21□□□□□ -1.74
SHMT2P34897 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.2□□□□□ -1.74
SHMT2P34897 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SHMT2P34897 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SHMT2P34897 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHMT2P34897 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SHMT2P34897 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SHMT2P34897 AC083799.1-201ENST00000366451 910 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AL034403.1-201ENST00000399414 885 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 RPS20P25-201ENST00000412447 352 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.2□□□□□ -1.74
SHMT2P34897 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.2□□□□□ -1.74
SHMT2P34897 P2RY10P2-201ENST00000416730 913 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 MTCYBP7-201ENST00000419540 1134 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.2□□□□□ -1.74
SHMT2P34897 COX6CP17-201ENST00000421389 185 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AC073335.1-201ENST00000427776 363 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 CEACAMP1-201ENST00000434624 1035 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.2□□□□□ -1.74
SHMT2P34897 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.2□□□□□ -1.74
SHMT2P34897 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 BUD31P2-201ENST00000449374 300 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AC069277.2-201ENST00000454211 432 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 EIF2S2P4-201ENST00000461070 984 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 RPS23P7-201ENST00000466210 444 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AC109327.1-201ENST00000471666 403 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 RPL35P6-201ENST00000490024 372 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AL592156.1-201ENST00000508758 304 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AC006499.6-201ENST00000511169 607 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.2□□□□□ -1.74
SHMT2P34897 AC067904.2-201ENST00000517322 1283 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 OR7E10P-201ENST00000526420 991 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AC092868.3-201ENST00000560515 784 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.2□□□□□ -1.74
SHMT2P34897 IPO5P1-202ENST00000600039 287 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AL445423.1-201ENST00000609941 536 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.2□□□□□ -1.74
SHMT2P34897 AC006338.2-201ENST00000616864 791 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AC105105.5-201ENST00000622635 1294 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AP003497.2-201ENST00000624220 967 ntBASIC4.2□□□□□ -1.74
SHMT2P34897 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.2□□□□□ -1.74
SHMT2P34897 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHMT2P34897 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHMT2P34897 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.2□□□□□ -1.74
SHMT2P34897 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHMT2P34897 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SHMT2P34897 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHMT2P34897 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
SHMT2P34897 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHMT2P34897 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHMT2P34897 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
SHMT2P34897 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHMT2P34897 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHMT2P34897 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHMT2P34897 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
SHMT2P34897 RNU1-15P-201ENST00000353977 144 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 RNU4-7P-201ENST00000364758 141 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 MT-TP-201ENST00000387461 68 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 SNORD65-201ENST00000391079 73 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 AC097374.1-203ENST00000400783 485 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.19□□□□□ -1.74
SHMT2P34897 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHMT2P34897 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
SHMT2P34897 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.19□□□□□ -1.74
SHMT2P34897 CHIAP3-201ENST00000423668 1133 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 IPMKP1-201ENST00000425988 855 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 NANOGP6-201ENST00000429190 847 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 AP000936.3-201ENST00000438127 255 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.19□□□□□ -1.74
SHMT2P34897 AL162388.1-201ENST00000450912 352 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 AC009963.2-201ENST00000453431 138 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.19□□□□□ -1.74
SHMT2P34897 HMGB3P13-201ENST00000511263 607 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 SNORA48.9-201ENST00000516419 162 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 IGKV2D-10-201ENST00000520194 281 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.19□□□□□ -1.74
SHMT2P34897 AC109635.6-201ENST00000525487 1113 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHMT2P34897 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.19□□□□□ -1.74
SHMT2P34897 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.19□□□□□ -1.74
SHMT2P34897 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.19□□□□□ -1.74
SHMT2P34897 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.19□□□□□ -1.74
SHMT2P34897 AC114781.5-201ENST00000615297 108 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms