Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RN7SL176P-201ENST00000580352 264 ntBASIC5.13□□□□□ -1.59
HOXC6P09630 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC6P09630 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.13□□□□□ -1.59
HOXC6P09630 AC090948.2-201ENST00000607363 564 ntBASIC5.13□□□□□ -1.59
HOXC6P09630 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXC6P09630 AC022079.1-201ENST00000621546 602 ntBASIC5.13□□□□□ -1.59
HOXC6P09630 AC126544.2-201ENST00000625174 749 ntBASIC5.13□□□□□ -1.59
HOXC6P09630 AC006065.6-201ENST00000625201 545 ntBASIC5.13□□□□□ -1.59
HOXC6P09630 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC6P09630 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HOXC6P09630 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HOXC6P09630 CUL4AP1-201ENST00000514750 1863 ntBASIC5.13□□□□□ -1.59
HOXC6P09630 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC6P09630 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC6P09630 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXC6P09630 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HOXC6P09630 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC6P09630 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC6P09630 AC093909.5-201ENST00000621839 1799 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC6P09630 AC027290.2-201ENST00000623210 18662 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 RNU6-697P-201ENST00000363348 107 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 MIR23B-201ENST00000384832 97 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 AC007068.1-201ENST00000396690 844 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 PPIAP31-201ENST00000405422 495 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC6P09630 MTND1P33-201ENST00000446251 917 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC6P09630 AL935212.3-201ENST00000450729 284 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC6P09630 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
HOXC6P09630 BOLA3P3-201ENST00000505182 232 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 SUMO2P5-201ENST00000506790 245 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
HOXC6P09630 PARP4P3-201ENST00000510265 317 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC6P09630 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC6P09630 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC6P09630 OR8R1P-201ENST00000543943 764 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC6P09630 AC087477.6-201ENST00000559595 843 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 MIR4509-3-201ENST00000578671 94 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 MIR4509-2-201ENST00000583920 94 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 AC010487.1-201ENST00000594408 1172 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 AC011492.1-201ENST00000600023 315 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 AC113403.1-201ENST00000604910 193 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 Z99289.3-201ENST00000605586 594 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 AP005229.2-201ENST00000609980 697 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC6P09630 AC009464.1-201ENST00000615731 469 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 MIR4509-1-201ENST00000618224 94 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 AC008785.1-201ENST00000624475 456 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 AC019226.2-201ENST00000625973 424 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 AL590396.4-201ENST00000636779 956 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HOXC6P09630 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC6P09630 AC005261.4-201ENST00000600047 1385 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC6P09630 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC6P09630 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC6P09630 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC6P09630 LINC00622-201ENST00000562811 1570 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC6P09630 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC6P09630 HSPD1P14-201ENST00000432666 1618 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 AL391684.1-202ENST00000641293 1636 ntBASIC5.12□□□□□ -1.59
HOXC6P09630 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC6P09630 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC6P09630 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC6P09630 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC6P09630 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC6P09630 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HOXC6P09630 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC6P09630 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC6P09630 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC6P09630 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC6P09630 MIR16-2-201ENST00000362117 81 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC6P09630 MTND2P16-201ENST00000419987 799 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC6P09630 AL132765.1-201ENST00000434165 553 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC6P09630 NMNAT1P2-201ENST00000435192 860 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 GTF3AP5-201ENST00000442645 697 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 RNFT1P2-201ENST00000443064 757 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC6P09630 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC6P09630 MTCYBP35-201ENST00000503630 1137 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC6P09630 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC6P09630 AC067904.2-201ENST00000517322 1283 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 NPM1P35-201ENST00000533043 868 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC6P09630 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC6P09630 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC6P09630 AC023825.1-201ENST00000566704 1030 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 BNIP3P22-201ENST00000593399 556 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC6P09630 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms