Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CTSDP07339 TMSB10P2-201ENST00000416049 131 ntBASIC3.42□□□□□ -1.86
CTSDP07339 AL590139.1-201ENST00000416267 400 ntBASIC3.42□□□□□ -1.86
CTSDP07339 AC119751.6-201ENST00000416712 186 ntBASIC3.42□□□□□ -1.86
CTSDP07339 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.42□□□□□ -1.86
CTSDP07339 IFNNP1-201ENST00000429219 553 ntBASIC3.42□□□□□ -1.86
CTSDP07339 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.42□□□□□ -1.86
CTSDP07339 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.42□□□□□ -1.86
CTSDP07339 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.42□□□□□ -1.86
CTSDP07339 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.42□□□□□ -1.86
CTSDP07339 AL513533.1-201ENST00000453728 415 ntBASIC3.42□□□□□ -1.86
CTSDP07339 RPL10P17-201ENST00000453852 316 ntBASIC3.42□□□□□ -1.86
CTSDP07339 SBDSP1-204ENST00000453858 737 ntBASIC3.42□□□□□ -1.86
CTSDP07339 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.42□□□□□ -1.86
CTSDP07339 RNU6-599P-201ENST00000459383 107 ntBASIC3.42□□□□□ -1.86
CTSDP07339 RNU6-1193P-201ENST00000459461 107 ntBASIC3.42□□□□□ -1.86
CTSDP07339 RPL21P126-201ENST00000470049 478 ntBASIC3.42□□□□□ -1.86
CTSDP07339 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.42□□□□□ -1.86
CTSDP07339 AC007686.1-201ENST00000488511 463 ntBASIC3.42□□□□□ -1.86
CTSDP07339 RPS23P1-201ENST00000491662 432 ntBASIC3.42□□□□□ -1.86
CTSDP07339 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.42□□□□□ -1.86
CTSDP07339 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.42□□□□□ -1.86
CTSDP07339 AC093720.1-201ENST00000505681 714 ntBASIC3.42□□□□□ -1.86
CTSDP07339 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.42□□□□□ -1.86
CTSDP07339 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.42□□□□□ -1.86
CTSDP07339 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.42□□□□□ -1.86
CTSDP07339 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.42□□□□□ -1.86
CTSDP07339 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.42□□□□□ -1.86
CTSDP07339 AC091515.1-201ENST00000548110 679 ntBASIC3.42□□□□□ -1.86
CTSDP07339 CBX3P5-201ENST00000552017 521 ntBASIC3.42□□□□□ -1.86
CTSDP07339 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.42□□□□□ -1.86
CTSDP07339 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.42□□□□□ -1.86
CTSDP07339 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.42□□□□□ -1.86
CTSDP07339 AC141257.3-201ENST00000572906 215 ntBASIC3.42□□□□□ -1.86
CTSDP07339 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.42□□□□□ -1.86
CTSDP07339 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.42□□□□□ -1.86
CTSDP07339 AC115286.1-201ENST00000604298 434 ntBASIC3.42□□□□□ -1.86
CTSDP07339 AC090948.2-201ENST00000607363 564 ntBASIC3.42□□□□□ -1.86
CTSDP07339 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.42□□□□□ -1.86
CTSDP07339 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.42□□□□□ -1.86
CTSDP07339 AL035461.2-201ENST00000619201 524 ntBASIC3.42□□□□□ -1.86
CTSDP07339 RNU6-368P-201ENST00000620928 107 ntBASIC3.42□□□□□ -1.86
CTSDP07339 AC010809.3-201ENST00000621310 641 ntBASIC3.42□□□□□ -1.86
CTSDP07339 RNU6-538P-201ENST00000622329 107 ntBASIC3.42□□□□□ -1.86
CTSDP07339 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CTSDP07339 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CTSDP07339 AC053481.2-202ENST00000582394 1500 ntBASIC3.42□□□□□ -1.86
CTSDP07339 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CTSDP07339 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.42□□□□□ -1.86
CTSDP07339 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.42□□□□□ -1.86
CTSDP07339 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CTSDP07339 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTSDP07339 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTSDP07339 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CTSDP07339 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.41□□□□□ -1.86
CTSDP07339 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.41□□□□□ -1.86
CTSDP07339 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CTSDP07339 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
CTSDP07339 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CTSDP07339 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.41□□□□□ -1.86
CTSDP07339 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CTSDP07339 LINC00561-201ENST00000565815 2738 ntBASIC3.41□□□□□ -1.86
CTSDP07339 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.41□□□□□ -1.86
CTSDP07339 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTSDP07339 RNVU1-6-201ENST00000364688 164 ntBASIC3.41□□□□□ -1.86
CTSDP07339 RNA5SP505-201ENST00000364748 108 ntBASIC3.41□□□□□ -1.86
CTSDP07339 CYB5AP4-201ENST00000396692 399 ntBASIC3.41□□□□□ -1.86
CTSDP07339 AL583835.1-201ENST00000399570 407 ntBASIC3.41□□□□□ -1.86
CTSDP07339 RPL37P18-201ENST00000411602 243 ntBASIC3.41□□□□□ -1.86
CTSDP07339 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CTSDP07339 AC006065.1-201ENST00000422539 802 ntBASIC3.41□□□□□ -1.86
CTSDP07339 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.41□□□□□ -1.86
CTSDP07339 RPL23AP46-201ENST00000438548 490 ntBASIC3.41□□□□□ -1.86
CTSDP07339 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.41□□□□□ -1.86
CTSDP07339 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.41□□□□□ -1.86
CTSDP07339 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CTSDP07339 RPL21P71-201ENST00000465598 459 ntBASIC3.41□□□□□ -1.86
CTSDP07339 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
CTSDP07339 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.41□□□□□ -1.86
CTSDP07339 RNU7-143P-201ENST00000516781 65 ntBASIC3.41□□□□□ -1.86
CTSDP07339 RN7SKP92-201ENST00000517266 244 ntBASIC3.41□□□□□ -1.86
CTSDP07339 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CTSDP07339 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.41□□□□□ -1.86
CTSDP07339 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.41□□□□□ -1.86
CTSDP07339 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.41□□□□□ -1.86
CTSDP07339 RPL23AP87-202ENST00000573039 466 ntBASIC3.41□□□□□ -1.86
CTSDP07339 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.41□□□□□ -1.86
CTSDP07339 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.41□□□□□ -1.86
CTSDP07339 AC012417.1-201ENST00000582307 1039 ntBASIC3.41□□□□□ -1.86
CTSDP07339 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.41□□□□□ -1.86
CTSDP07339 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.41□□□□□ -1.86
CTSDP07339 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.41□□□□□ -1.86
CTSDP07339 AL445363.3-201ENST00000623080 671 ntBASIC3.41□□□□□ -1.86
CTSDP07339 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.41□□□□□ -1.86
CTSDP07339 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTSDP07339 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.41□□□□□ -1.86
CTSDP07339 HSPA8P1-201ENST00000425843 1833 ntBASIC3.41□□□□□ -1.86
CTSDP07339 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTSDP07339 DHX40P1-201ENST00000588725 1412 ntBASIC3.41□□□□□ -1.86
CTSDP07339 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms