Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 UBA52P3-201ENST00000491303 382 ntBASIC3.59□□□□□ -1.83
HLA-DQB1P01920 RPS23P1-201ENST00000491662 432 ntBASIC3.59□□□□□ -1.83
HLA-DQB1P01920 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 AC117525.1-201ENST00000515228 503 ntBASIC3.59□□□□□ -1.83
HLA-DQB1P01920 snoU109.6-201ENST00000516831 118 ntBASIC3.59□□□□□ -1.83
HLA-DQB1P01920 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 AP001160.4-201ENST00000596971 382 ntBASIC3.59□□□□□ -1.83
HLA-DQB1P01920 GMCL1P2-201ENST00000605230 823 ntBASIC3.59□□□□□ -1.83
HLA-DQB1P01920 AC023813.4-201ENST00000607580 580 ntBASIC3.59□□□□□ -1.83
HLA-DQB1P01920 AC007620.3-201ENST00000608131 497 ntBASIC3.59□□□□□ -1.83
HLA-DQB1P01920 AC004825.2-201ENST00000616634 455 ntBASIC3.59□□□□□ -1.83
HLA-DQB1P01920 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 MIR6729-201ENST00000618194 65 ntBASIC3.59□□□□□ -1.83
HLA-DQB1P01920 SNORA11.6-201ENST00000619030 128 ntBASIC3.59□□□□□ -1.83
HLA-DQB1P01920 AC015908.5-201ENST00000623289 343 ntBASIC3.59□□□□□ -1.83
HLA-DQB1P01920 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DQB1P01920 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DQB1P01920 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.59□□□□□ -1.84
HLA-DQB1P01920 AC008725.1-201ENST00000605123 2263 ntBASIC3.59□□□□□ -1.84
HLA-DQB1P01920 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.59□□□□□ -1.84
HLA-DQB1P01920 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 RNA5SP105-201ENST00000391123 113 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 RN7SKP106-201ENST00000410832 272 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 PGBD4P8-201ENST00000412993 562 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AC009302.1-201ENST00000417147 390 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AC127526.1-201ENST00000417526 366 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AC244453.4-201ENST00000419150 388 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AL590609.2-201ENST00000421430 368 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 RPL21P109-201ENST00000422213 475 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 VN1R54P-201ENST00000435210 1049 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AL357520.1-201ENST00000441557 453 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 RPL36AP15-201ENST00000444514 266 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 CCRL1P1-201ENST00000449542 1053 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 RPS3AP53-201ENST00000454716 778 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 RPS3AP41-201ENST00000462701 778 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 LARP7P4-201ENST00000481075 878 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 KCTD9P2-201ENST00000512203 1013 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 RNU6-551P-201ENST00000516661 103 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 IGKV2D-23-201ENST00000518179 286 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AP001781.1-201ENST00000530977 207 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AC008147.3-201ENST00000548666 354 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 MIR4330-201ENST00000579077 105 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 MIR3934-201ENST00000579806 107 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 RN7SL690P-201ENST00000582087 240 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AL135786.2-201ENST00000608422 615 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AC004241.3-201ENST00000611728 517 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 MIR6862-1-201ENST00000613016 70 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 MIR6862-2-201ENST00000614755 70 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 AC087565.3-202ENST00000642085 1603 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 CR381670.1-201ENST00000624291 1693 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HLA-DQB1P01920 PRO1804-201ENST00000623780 2050 ntBASIC3.58□□□□□ -1.84
HLA-DQB1P01920 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQB1P01920 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQB1P01920 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQB1P01920 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQB1P01920 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQB1P01920 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DQB1P01920 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms