Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.98□□□□□ -1.77
TNFP01375 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.98□□□□□ -1.77
TNFP01375 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.98□□□□□ -1.77
TNFP01375 AC084759.1-201ENST00000561168 290 ntBASIC3.98□□□□□ -1.77
TNFP01375 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.98□□□□□ -1.77
TNFP01375 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.98□□□□□ -1.77
TNFP01375 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.98□□□□□ -1.77
TNFP01375 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.98□□□□□ -1.77
TNFP01375 QTRT1P1-201ENST00000604344 1078 ntBASIC3.98□□□□□ -1.77
TNFP01375 AL592436.1-201ENST00000605135 558 ntBASIC3.98□□□□□ -1.77
TNFP01375 AL356863.1-201ENST00000623378 1080 ntBASIC3.98□□□□□ -1.77
TNFP01375 AC138907.10-201ENST00000623708 983 ntBASIC3.98□□□□□ -1.77
TNFP01375 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.98□□□□□ -1.77
TNFP01375 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TNFP01375 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TNFP01375 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TNFP01375 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TNFP01375 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TNFP01375 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.97□□□□□ -1.77
TNFP01375 ASNSP1-204ENST00000641977 1664 ntBASIC3.97□□□□□ -1.77
TNFP01375 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.97□□□□□ -1.77
TNFP01375 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.97□□□□□ -1.77
TNFP01375 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
TNFP01375 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TNFP01375 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TNFP01375 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TNFP01375 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TNFP01375 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.97□□□□□ -1.77
TNFP01375 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.97□□□□□ -1.77
TNFP01375 RNU1-85P-201ENST00000364127 164 ntBASIC3.97□□□□□ -1.77
TNFP01375 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFP01375 MIR554-201ENST00000384874 96 ntBASIC3.97□□□□□ -1.77
TNFP01375 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TNFP01375 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.97□□□□□ -1.77
TNFP01375 RN7SKP159-201ENST00000410657 292 ntBASIC3.97□□□□□ -1.77
TNFP01375 PGBD4P8-201ENST00000412993 562 ntBASIC3.97□□□□□ -1.77
TNFP01375 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TNFP01375 AC234781.4-201ENST00000419384 244 ntBASIC3.97□□□□□ -1.77
TNFP01375 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFP01375 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.97□□□□□ -1.77
TNFP01375 RPL5P16-201ENST00000471467 790 ntBASIC3.97□□□□□ -1.77
TNFP01375 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFP01375 AC146944.2-203ENST00000502493 354 ntBASIC3.97□□□□□ -1.77
TNFP01375 AC020593.1-201ENST00000507399 299 ntBASIC3.97□□□□□ -1.77
TNFP01375 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFP01375 SAP18P1-201ENST00000512058 390 ntBASIC3.97□□□□□ -1.77
TNFP01375 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFP01375 AC139495.1-202ENST00000513164 354 ntBASIC3.97□□□□□ -1.77
TNFP01375 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFP01375 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFP01375 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.97□□□□□ -1.77
TNFP01375 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.97□□□□□ -1.77
TNFP01375 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TNFP01375 AC011270.1-201ENST00000558606 583 ntBASIC3.97□□□□□ -1.77
TNFP01375 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.97□□□□□ -1.77
TNFP01375 RN7SL703P-201ENST00000578485 302 ntBASIC3.97□□□□□ -1.77
TNFP01375 MIR5685-201ENST00000579080 79 ntBASIC3.97□□□□□ -1.77
TNFP01375 AC006130.2-201ENST00000586202 326 ntBASIC3.97□□□□□ -1.77
TNFP01375 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.97□□□□□ -1.77
TNFP01375 AL451086.1-201ENST00000605596 223 ntBASIC3.97□□□□□ -1.77
TNFP01375 AC026979.4-201ENST00000606555 645 ntBASIC3.97□□□□□ -1.77
TNFP01375 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.97□□□□□ -1.77
TNFP01375 AC023509.5-201ENST00000617434 807 ntBASIC3.97□□□□□ -1.77
TNFP01375 AP001005.3-201ENST00000622049 129 ntBASIC3.97□□□□□ -1.77
TNFP01375 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
TNFP01375 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.97□□□□□ -1.77
TNFP01375 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.97□□□□□ -1.77
TNFP01375 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.97□□□□□ -1.77
TNFP01375 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.97□□□□□ -1.77
TNFP01375 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
TNFP01375 OR51C1P-202ENST00000641159 1444 ntBASIC3.96□□□□□ -1.77
TNFP01375 AC011503.2-201ENST00000594230 1500 ntBASIC3.96□□□□□ -1.78
TNFP01375 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFP01375 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
TNFP01375 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
TNFP01375 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TNFP01375 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TNFP01375 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.96□□□□□ -1.78
TNFP01375 SNORA79B-201ENST00000410557 148 ntBASIC3.96□□□□□ -1.78
TNFP01375 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.96□□□□□ -1.78
TNFP01375 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFP01375 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFP01375 GAPDHP36-201ENST00000480688 918 ntBASIC3.96□□□□□ -1.78
TNFP01375 RPS3AP6-201ENST00000484430 795 ntBASIC3.96□□□□□ -1.78
TNFP01375 RPS4XP15-201ENST00000489210 795 ntBASIC3.96□□□□□ -1.78
TNFP01375 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.96□□□□□ -1.78
TNFP01375 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.96□□□□□ -1.78
TNFP01375 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFP01375 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFP01375 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.96□□□□□ -1.78
TNFP01375 AC114878.2-201ENST00000604863 1251 ntBASIC3.96□□□□□ -1.78
TNFP01375 AC064801.1-201ENST00000612025 407 ntBASIC3.96□□□□□ -1.78
TNFP01375 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFP01375 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.96□□□□□ -1.78
TNFP01375 AC105074.1-201ENST00000623380 3095 ntBASIC3.96□□□□□ -1.78
TNFP01375 AC006042.3-201ENST00000454684 1469 ntBASIC3.96□□□□□ -1.78
TNFP01375 FAM91A3P-201ENST00000456826 2544 ntBASIC3.96□□□□□ -1.78
TNFP01375 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFP01375 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
TNFP01375 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms