Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC026368.1-201ENST00000614934 690 ntBASIC4.41□□□□□ -1.7
SNX3O60493 MIR6837-201ENST00000620884 64 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AC103858.2-201ENST00000621471 543 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AC008785.1-201ENST00000624475 456 ntBASIC4.41□□□□□ -1.7
SNX3O60493 U6.107-201ENST00000637108 79 ntBASIC4.41□□□□□ -1.7
SNX3O60493 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
SNX3O60493 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX3O60493 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNX3O60493 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNX3O60493 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.41□□□□□ -1.7
SNX3O60493 AC012020.1-201ENST00000624541 1728 ntBASIC4.41□□□□□ -1.7
SNX3O60493 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.4□□□□□ -1.7
SNX3O60493 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SNX3O60493 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SNX3O60493 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.4□□□□□ -1.7
SNX3O60493 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SNX3O60493 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.4□□□□□ -1.7
SNX3O60493 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SNX3O60493 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.4□□□□□ -1.7
SNX3O60493 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SNX3O60493 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SNX3O60493 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SNX3O60493 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNX3O60493 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SNX3O60493 RNU6-468P-201ENST00000384003 109 ntBASIC4.4□□□□□ -1.71
SNX3O60493 MIR92A2-201ENST00000385299 75 ntBASIC4.4□□□□□ -1.71
SNX3O60493 ATP5F1P2-201ENST00000398143 760 ntBASIC4.4□□□□□ -1.71
SNX3O60493 HMGB3P19-201ENST00000403971 560 ntBASIC4.4□□□□□ -1.71
SNX3O60493 RPL35AP24-201ENST00000413846 330 ntBASIC4.4□□□□□ -1.71
SNX3O60493 AC099336.2-201ENST00000422457 254 ntBASIC4.4□□□□□ -1.71
SNX3O60493 IPPKP1-201ENST00000422501 768 ntBASIC4.4□□□□□ -1.71
SNX3O60493 AC073310.1-201ENST00000423226 1033 ntBASIC4.4□□□□□ -1.71
SNX3O60493 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.4□□□□□ -1.71
SNX3O60493 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX3O60493 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNX3O60493 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX3O60493 AL138899.2-201ENST00000439139 499 ntBASIC4.4□□□□□ -1.71
SNX3O60493 AL645931.1-201ENST00000439737 410 ntBASIC4.4□□□□□ -1.71
SNX3O60493 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX3O60493 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX3O60493 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX3O60493 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX3O60493 AL096803.2-201ENST00000450032 677 ntBASIC4.4□□□□□ -1.71
SNX3O60493 AC133473.1-201ENST00000455173 299 ntBASIC4.4□□□□□ -1.71
SNX3O60493 RPS5P7-201ENST00000456664 608 ntBASIC4.4□□□□□ -1.71
SNX3O60493 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX3O60493 AL133477.1-201ENST00000457472 514 ntBASIC4.4□□□□□ -1.71
SNX3O60493 AC099560.2-201ENST00000457554 255 ntBASIC4.4□□□□□ -1.71
SNX3O60493 RPL36AP41-201ENST00000493820 306 ntBASIC4.4□□□□□ -1.71
SNX3O60493 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SNX3O60493 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX3O60493 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX3O60493 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNX3O60493 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX3O60493 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX3O60493 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.4□□□□□ -1.71
SNX3O60493 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX3O60493 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX3O60493 AC010476.1-201ENST00000519111 851 ntBASIC4.4□□□□□ -1.71
SNX3O60493 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX3O60493 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
SNX3O60493 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SNX3O60493 AC107016.1-201ENST00000550463 337 ntBASIC4.4□□□□□ -1.71
SNX3O60493 AC090666.1-201ENST00000578241 445 ntBASIC4.4□□□□□ -1.71
SNX3O60493 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX3O60493 BNIP3P39-201ENST00000601077 554 ntBASIC4.4□□□□□ -1.71
SNX3O60493 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX3O60493 AC096553.1-201ENST00000605169 829 ntBASIC4.4□□□□□ -1.71
SNX3O60493 AL139022.2-201ENST00000606934 443 ntBASIC4.4□□□□□ -1.71
SNX3O60493 AC024933.1-201ENST00000608472 348 ntBASIC4.4□□□□□ -1.71
SNX3O60493 FRG1HP-204ENST00000617940 757 ntBASIC4.4□□□□□ -1.71
SNX3O60493 AL359715.5-201ENST00000623431 443 ntBASIC4.4□□□□□ -1.71
SNX3O60493 AP002505.2-201ENST00000623585 696 ntBASIC4.4□□□□□ -1.71
SNX3O60493 AL132640.2-201ENST00000559968 1698 ntBASIC4.4□□□□□ -1.71
SNX3O60493 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX3O60493 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SNX3O60493 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNX3O60493 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SNX3O60493 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
SNX3O60493 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX3O60493 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX3O60493 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SNX3O60493 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNX3O60493 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX3O60493 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SNX3O60493 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SNX3O60493 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SNX3O60493 RNA5SP510-201ENST00000364697 99 ntBASIC4.39□□□□□ -1.71
SNX3O60493 RNU6-207P-201ENST00000384137 107 ntBASIC4.39□□□□□ -1.71
SNX3O60493 MIR621-201ENST00000384919 96 ntBASIC4.39□□□□□ -1.71
SNX3O60493 ZNF603P-201ENST00000405613 487 ntBASIC4.39□□□□□ -1.71
SNX3O60493 AP002530.1-201ENST00000405705 684 ntBASIC4.39□□□□□ -1.71
SNX3O60493 AL355615.1-201ENST00000406187 641 ntBASIC4.39□□□□□ -1.71
SNX3O60493 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNX3O60493 MIR1911-201ENST00000410783 80 ntBASIC4.39□□□□□ -1.71
SNX3O60493 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX3O60493 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.39□□□□□ -1.71
SNX3O60493 RPS24P8-201ENST00000431490 402 ntBASIC4.39□□□□□ -1.71
SNX3O60493 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX3O60493 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms