Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MTND4P10-201ENST00000446199 1363 ntBASIC3.22□□□□□ -1.89
SSSCA1O60232 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSSCA1O60232 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
SSSCA1O60232 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSSCA1O60232 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSSCA1O60232 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.21□□□□□ -1.9
SSSCA1O60232 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SSSCA1O60232 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SSSCA1O60232 OR4K15-201ENST00000305051 1216 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSSCA1O60232 SNORA60-201ENST00000362396 134 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 RN7SKP44-201ENST00000363602 316 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 RPL23AP59-201ENST00000399415 461 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 HLFP1-201ENST00000402375 499 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 AC006065.1-201ENST00000422539 802 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 RPS26P40-201ENST00000435209 294 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 MTND4LP12-201ENST00000448237 295 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.21□□□□□ -1.9
SSSCA1O60232 FABP3P2-201ENST00000453169 399 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 RN7SL810P-201ENST00000493031 276 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 RN7SL691P-201ENST00000494487 301 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSSCA1O60232 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.21□□□□□ -1.9
SSSCA1O60232 RN7SKP83-201ENST00000516512 178 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.21□□□□□ -1.9
SSSCA1O60232 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.21□□□□□ -1.9
SSSCA1O60232 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSSCA1O60232 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.21□□□□□ -1.9
SSSCA1O60232 OR5D15P-201ENST00000531671 942 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.21□□□□□ -1.9
SSSCA1O60232 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.21□□□□□ -1.9
SSSCA1O60232 AC008147.3-201ENST00000548666 354 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SSSCA1O60232 MIR4644-201ENST00000579929 84 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.21□□□□□ -1.9
SSSCA1O60232 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.21□□□□□ -1.9
SSSCA1O60232 AC133644.2-201ENST00000608142 540 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 AC090510.2-201ENST00000617465 629 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 AL139254.3-201ENST00000641097 674 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SSSCA1O60232 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSSCA1O60232 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSSCA1O60232 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSSCA1O60232 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
SSSCA1O60232 Z73965.1-201ENST00000623412 2297 ntBASIC3.21□□□□□ -1.9
SSSCA1O60232 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSSCA1O60232 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSSCA1O60232 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SSSCA1O60232 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSSCA1O60232 RNA5SP87-201ENST00000384155 118 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 Z98941.1-201ENST00000407764 100 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 RN7SKP182-201ENST00000410772 298 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.2□□□□□ -1.9
SSSCA1O60232 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.2□□□□□ -1.9
SSSCA1O60232 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.2□□□□□ -1.9
SSSCA1O60232 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.2□□□□□ -1.9
SSSCA1O60232 HIGD1AP4-201ENST00000430194 280 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.2□□□□□ -1.9
SSSCA1O60232 RPS3AP54-201ENST00000435535 734 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.2□□□□□ -1.9
SSSCA1O60232 RPS17P13-201ENST00000448974 407 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.2□□□□□ -1.9
SSSCA1O60232 RNA5SP246-201ENST00000458909 119 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 AC092691.2-201ENST00000461787 803 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 OR52A4P-201ENST00000472867 958 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 S100A11P1-201ENST00000477525 312 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 AC004453.1-201ENST00000487895 408 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.2□□□□□ -1.9
SSSCA1O60232 NDUFB5P1-201ENST00000508134 564 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 AC008958.1-201ENST00000511047 682 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SSSCA1O60232 TRAV8-5-201ENST00000537369 341 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC3.2□□□□□ -1.9
SSSCA1O60232 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SSSCA1O60232 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.2□□□□□ -1.9
SSSCA1O60232 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.2□□□□□ -1.9
SSSCA1O60232 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.2□□□□□ -1.9
SSSCA1O60232 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.2□□□□□ -1.9
SSSCA1O60232 Z82195.1-201ENST00000604558 398 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 AC090948.1-201ENST00000607464 549 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 AL645927.2-201ENST00000618350 349 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 AL445528.2-201ENST00000620582 470 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 OR6C71P-202ENST00000641886 1107 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
SSSCA1O60232 AC131971.1-201ENST00000332881 1482 ntBASIC3.2□□□□□ -1.9
SSSCA1O60232 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.2□□□□□ -1.9
SSSCA1O60232 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.2□□□□□ -1.9
SSSCA1O60232 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSSCA1O60232 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SSSCA1O60232 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.2□□□□□ -1.9
SSSCA1O60232 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.2□□□□□ -1.9
SSSCA1O60232 RPS4XP5-202ENST00000449995 1334 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 DHX40P1-201ENST00000588725 1412 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.19□□□□□ -1.9
SSSCA1O60232 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSSCA1O60232 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSSCA1O60232 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.19□□□□□ -1.9
SSSCA1O60232 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.19□□□□□ -1.9
SSSCA1O60232 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.19□□□□□ -1.9
SSSCA1O60232 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms