Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC092954.1-201ENST00000609121 445 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 AC116447.1-201ENST00000613153 453 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM38O00635 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
TRIM38O00635 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM38O00635 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TRIM38O00635 AC119744.1-201ENST00000454746 1715 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TRIM38O00635 CASC19-204ENST00000641001 2055 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM38O00635 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TRIM38O00635 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM38O00635 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM38O00635 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRIM38O00635 AL049737.1-201ENST00000413920 1403 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM38O00635 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM38O00635 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM38O00635 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM38O00635 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM38O00635 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM38O00635 RNU6-906P-201ENST00000384700 70 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 SKINT1L-201ENST00000401057 817 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 RN7SKP126-201ENST00000411143 300 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 AC022028.1-201ENST00000412054 408 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM38O00635 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM38O00635 AL592310.1-201ENST00000414330 671 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 AC009965.2-201ENST00000425328 970 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 NIPA2P1-201ENST00000426223 976 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 AL009174.1-201ENST00000426577 416 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 RBMY2QP-201ENST00000429799 1147 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 MTND1P20-201ENST00000430341 950 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM38O00635 AC112492.1-201ENST00000449607 712 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM38O00635 HIGD1AP8-201ENST00000453927 274 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM38O00635 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 AC108161.1-201ENST00000461060 402 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM38O00635 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM38O00635 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM38O00635 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM38O00635 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM38O00635 AC010486.3-201ENST00000511602 785 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 AC108043.1-201ENST00000512696 574 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 AC092593.2-201ENST00000513866 913 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM38O00635 SCARNA20.4-201ENST00000516969 131 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 MTND1P5-201ENST00000517906 940 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM38O00635 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.24□□□□□ -1.57
TRIM38O00635 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.24□□□□□ -1.57
TRIM38O00635 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM38O00635 AC134698.4-201ENST00000523451 826 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM38O00635 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM38O00635 AC092490.3-201ENST00000545370 572 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.24□□□□□ -1.57
TRIM38O00635 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM38O00635 AC005341.1-201ENST00000571086 708 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM38O00635 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM38O00635 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM38O00635 AL138478.1-201ENST00000612252 832 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM38O00635 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM38O00635 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM38O00635 LINC02211-204ENST00000642024 1070 ntBASIC5.24□□□□□ -1.57
TRIM38O00635 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
TRIM38O00635 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM38O00635 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TRIM38O00635 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM38O00635 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
TRIM38O00635 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM38O00635 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM38O00635 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM38O00635 SNORA56-201ENST00000383966 129 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 MIR16-1-201ENST00000385271 89 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
TRIM38O00635 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
TRIM38O00635 NCSTNP1-201ENST00000406229 144 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 Z75741.2-201ENST00000417272 1167 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM38O00635 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM38O00635 AC234781.2-201ENST00000426370 994 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM38O00635 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM38O00635 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM38O00635 RPL12P17-201ENST00000432393 498 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM38O00635 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM38O00635 UBE2V1P5-201ENST00000440070 405 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 VN1R25P-201ENST00000443385 738 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 RPS6P2-201ENST00000454208 705 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 AC010468.1-201ENST00000461022 817 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms