Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.34□□□□□ -1.55
SMOQ99835 AP003033.1-201ENST00000527244 415 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.34□□□□□ -1.55
SMOQ99835 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.34□□□□□ -1.55
SMOQ99835 AC084824.1-201ENST00000550917 1005 ntBASIC5.34□□□□□ -1.55
SMOQ99835 DPRXP4-201ENST00000578053 568 ntBASIC5.34□□□□□ -1.55
SMOQ99835 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.34□□□□□ -1.55
SMOQ99835 PRPF19P1-201ENST00000584766 898 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AC106791.2-201ENST00000604680 391 ntBASIC5.34□□□□□ -1.55
SMOQ99835 MEMO1P5-201ENST00000604810 406 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AC105129.3-201ENST00000605455 485 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AC072039.2-201ENST00000608883 439 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AC099676.1-201ENST00000608886 657 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AP005137.2-201ENST00000609238 400 ntBASIC5.34□□□□□ -1.55
SMOQ99835 EIF3FP1-201ENST00000613970 806 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AC091932.2-201ENST00000623014 291 ntBASIC5.34□□□□□ -1.55
SMOQ99835 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMOQ99835 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMOQ99835 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.34□□□□□ -1.56
SMOQ99835 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.34□□□□□ -1.56
SMOQ99835 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SMOQ99835 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SMOQ99835 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SMOQ99835 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMOQ99835 AC007996.1-201ENST00000620414 2821 ntBASIC5.33□□□□□ -1.56
SMOQ99835 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
SMOQ99835 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SMOQ99835 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMOQ99835 AC131971.1-201ENST00000332881 1482 ntBASIC5.33□□□□□ -1.56
SMOQ99835 AC100871.1-201ENST00000507871 1456 ntBASIC5.33□□□□□ -1.56
SMOQ99835 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMOQ99835 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.33□□□□□ -1.56
SMOQ99835 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMOQ99835 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMOQ99835 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
SMOQ99835 RN7SKP95-201ENST00000362860 303 ntBASIC5.33□□□□□ -1.56
SMOQ99835 MIR525-201ENST00000384978 85 ntBASIC5.33□□□□□ -1.56
SMOQ99835 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SMOQ99835 AL645733.1-201ENST00000402250 217 ntBASIC5.33□□□□□ -1.56
SMOQ99835 U3.32-201ENST00000408116 212 ntBASIC5.33□□□□□ -1.56
SMOQ99835 RN7SKP125-201ENST00000410481 302 ntBASIC5.33□□□□□ -1.56
SMOQ99835 RN7SKP222-201ENST00000410651 315 ntBASIC5.33□□□□□ -1.56
SMOQ99835 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.33□□□□□ -1.56
SMOQ99835 AC004074.1-201ENST00000421810 1063 ntBASIC5.33□□□□□ -1.56
SMOQ99835 MRPS21P2-201ENST00000424704 264 ntBASIC5.33□□□□□ -1.56
SMOQ99835 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.33□□□□□ -1.56
SMOQ99835 ISCA1P2-201ENST00000438679 421 ntBASIC5.33□□□□□ -1.56
SMOQ99835 AC073648.4-201ENST00000442655 781 ntBASIC5.33□□□□□ -1.56
SMOQ99835 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.33□□□□□ -1.56
SMOQ99835 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.33□□□□□ -1.56
SMOQ99835 RPL7AP61-201ENST00000443410 636 ntBASIC5.33□□□□□ -1.56
SMOQ99835 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.33□□□□□ -1.56
SMOQ99835 AL354714.3-201ENST00000447284 493 ntBASIC5.33□□□□□ -1.56
SMOQ99835 PRPF38AP1-201ENST00000451976 933 ntBASIC5.33□□□□□ -1.56
SMOQ99835 CBX1P2-201ENST00000453841 458 ntBASIC5.33□□□□□ -1.56
SMOQ99835 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.33□□□□□ -1.56
SMOQ99835 snoU13.20-201ENST00000459180 104 ntBASIC5.33□□□□□ -1.56
SMOQ99835 AC104687.1-201ENST00000485829 412 ntBASIC5.33□□□□□ -1.56
SMOQ99835 RN7SL244P-201ENST00000493405 297 ntBASIC5.33□□□□□ -1.56
SMOQ99835 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.33□□□□□ -1.56
SMOQ99835 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMOQ99835 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.33□□□□□ -1.56
SMOQ99835 RNU6-232P-201ENST00000517144 64 ntBASIC5.33□□□□□ -1.56
SMOQ99835 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.33□□□□□ -1.56
SMOQ99835 AP002812.4-201ENST00000532139 286 ntBASIC5.33□□□□□ -1.56
SMOQ99835 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMOQ99835 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.33□□□□□ -1.56
SMOQ99835 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.33□□□□□ -1.56
SMOQ99835 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.33□□□□□ -1.56
SMOQ99835 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.33□□□□□ -1.56
SMOQ99835 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.33□□□□□ -1.56
SMOQ99835 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.33□□□□□ -1.56
SMOQ99835 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.33□□□□□ -1.56
SMOQ99835 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.33□□□□□ -1.56
SMOQ99835 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.33□□□□□ -1.56
SMOQ99835 AC002400.1-201ENST00000569310 726 ntBASIC5.33□□□□□ -1.56
SMOQ99835 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.33□□□□□ -1.56
SMOQ99835 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.33□□□□□ -1.56
SMOQ99835 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.33□□□□□ -1.56
SMOQ99835 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.33□□□□□ -1.56
SMOQ99835 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.33□□□□□ -1.56
SMOQ99835 AC090525.3-201ENST00000605601 189 ntBASIC5.33□□□□□ -1.56
SMOQ99835 AL139418.1-201ENST00000613613 177 ntBASIC5.33□□□□□ -1.56
SMOQ99835 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.33□□□□□ -1.56
SMOQ99835 AF001550.2-201ENST00000636643 217 ntBASIC5.33□□□□□ -1.56
SMOQ99835 AC093849.1-201ENST00000563631 2209 ntBASIC5.33□□□□□ -1.56
SMOQ99835 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMOQ99835 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SMOQ99835 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.33□□□□□ -1.56
SMOQ99835 INTS6P1-201ENST00000504674 2530 ntBASIC5.33□□□□□ -1.56
SMOQ99835 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMOQ99835 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMOQ99835 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SMOQ99835 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMOQ99835 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SMOQ99835 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SMOQ99835 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.32□□□□□ -1.56
SMOQ99835 MTCO1P6-201ENST00000481192 1384 ntBASIC5.32□□□□□ -1.56
SMOQ99835 AP000526.1-201ENST00000603308 1388 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms