Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
IFT140Q96RY7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
IFT140Q96RY7 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
IFT140Q96RY7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
IFT140Q96RY7 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
IFT140Q96RY7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC6.61□□□□□ -1.35
IFT140Q96RY7 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.61□□□□□ -1.35
IFT140Q96RY7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
IFT140Q96RY7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
IFT140Q96RY7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
IFT140Q96RY7 RPL23AP37-201ENST00000479658 549 ntBASIC6.61□□□□□ -1.35
IFT140Q96RY7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.61□□□□□ -1.35
IFT140Q96RY7 RNA5SP303-201ENST00000516192 130 ntBASIC6.61□□□□□ -1.35
IFT140Q96RY7 RN7SKP289-201ENST00000517244 295 ntBASIC6.61□□□□□ -1.35
IFT140Q96RY7 AC090136.1-201ENST00000520009 240 ntBASIC6.61□□□□□ -1.35
IFT140Q96RY7 AC027176.2-201ENST00000559166 746 ntBASIC6.61□□□□□ -1.35
IFT140Q96RY7 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.61□□□□□ -1.35
IFT140Q96RY7 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
IFT140Q96RY7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC6.61□□□□□ -1.35
IFT140Q96RY7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
IFT140Q96RY7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
IFT140Q96RY7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
IFT140Q96RY7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
IFT140Q96RY7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
IFT140Q96RY7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
IFT140Q96RY7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
IFT140Q96RY7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 MIR128-1-201ENST00000384921 82 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 SNORA48.2-201ENST00000390926 124 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AL161631.1-201ENST00000417933 486 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 RBMY1KP-201ENST00000423480 476 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 EIF4A1P11-201ENST00000451239 222 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 RPS4XP18-201ENST00000495480 763 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 RNU7-143P-201ENST00000516781 65 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AC090151.1-201ENST00000520784 730 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 AC090286.3-201ENST00000573133 187 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AL353726.1-201ENST00000614041 1000 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AC015722.2-201ENST00000622210 551 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 SCARNA15.3-201ENST00000626315 122 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 SCARNA4.1-201ENST00000628597 123 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AL392088.2-201ENST00000637607 285 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
IFT140Q96RY7 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
IFT140Q96RY7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
IFT140Q96RY7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
IFT140Q96RY7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
IFT140Q96RY7 RNA5SP187-201ENST00000384400 119 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 ZNF602P-201ENST00000405929 924 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AL391219.1-201ENST00000422570 483 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 CYCSP4-201ENST00000429682 331 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AC083863.1-201ENST00000438811 231 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AC017015.1-201ENST00000477387 286 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 AC063950.1-201ENST00000552036 308 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 RNU1-30P-201ENST00000606575 163 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 AL513477.2-201ENST00000607858 568 ntBASIC6.6□□□□□ -1.35
IFT140Q96RY7 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.6□□□□□ -1.35
IFT140Q96RY7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
IFT140Q96RY7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
IFT140Q96RY7 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
IFT140Q96RY7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
IFT140Q96RY7 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
IFT140Q96RY7 RN7SKP186-201ENST00000365371 303 ntBASIC6.59□□□□□ -1.36
IFT140Q96RY7 MIR1289-1-201ENST00000408836 144 ntBASIC6.59□□□□□ -1.36
IFT140Q96RY7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.59□□□□□ -1.36
IFT140Q96RY7 RPS3AP46-201ENST00000448352 682 ntBASIC6.59□□□□□ -1.36
IFT140Q96RY7 AC073387.1-201ENST00000453261 709 ntBASIC6.59□□□□□ -1.36
IFT140Q96RY7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
IFT140Q96RY7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.59□□□□□ -1.36
IFT140Q96RY7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
IFT140Q96RY7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC6.59□□□□□ -1.36
IFT140Q96RY7 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.59□□□□□ -1.36
IFT140Q96RY7 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.59□□□□□ -1.36
IFT140Q96RY7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.59□□□□□ -1.36
IFT140Q96RY7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.59□□□□□ -1.36
IFT140Q96RY7 HSPD1P14-201ENST00000432666 1618 ntBASIC6.59□□□□□ -1.36
IFT140Q96RY7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
IFT140Q96RY7 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
IFT140Q96RY7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.58□□□□□ -1.36
IFT140Q96RY7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
IFT140Q96RY7 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
IFT140Q96RY7 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
IFT140Q96RY7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
IFT140Q96RY7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
IFT140Q96RY7 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
IFT140Q96RY7 AC073136.1-201ENST00000449426 2884 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms