Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 ARL2BPP10-201ENST00000446487 531 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 RPS23P7-201ENST00000466210 444 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 AC068587.1-201ENST00000483613 781 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 AC010342.1-201ENST00000514047 877 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 MTCYBP19-201ENST00000517463 1124 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 TOMM20P2-201ENST00000540082 421 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 AC007599.1-201ENST00000568688 1174 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 AC068790.7-201ENST00000602347 528 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 AL139286.1-201ENST00000604465 483 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 AC006338.2-201ENST00000616864 791 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 MFSD8-216ENST00000641147 4009 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 SNORA37-201ENST00000384504 129 ntBASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 AC087650.1-201ENST00000431445 468 ntBASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 AC091390.1-201ENST00000433904 331 ntBASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 NDUFB4P12-201ENST00000513465 390 ntBASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 RN7SKP34-201ENST00000516142 244 ntBASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 HMGB3P26-201ENST00000560051 582 ntBASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 AP001160.4-201ENST00000596971 382 ntBASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 AL133243.1-201ENST00000614487 366 ntBASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 AC095038.2-201ENST00000621464 1070 ntBASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 AP005264.7-201ENST00000625003 745 ntBASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC112Q8NEF3 AP001486.2-201ENST00000561652 5113 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 HSPD1P11-201ENST00000508643 1702 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 AL450326.2-201ENST00000421913 1962 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 FABP12P1-201ENST00000401911 322 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 AL603766.1-201ENST00000407763 664 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 SNRPFP1-201ENST00000414761 252 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 VDAC1P6-201ENST00000430062 855 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 MTCO1P54-201ENST00000430139 712 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 MTND2P28-201ENST00000457540 1044 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 RPL12P20-201ENST00000475538 479 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 STRADBP1-201ENST00000478954 1281 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 RPL31P61-201ENST00000496160 376 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 PARP1P2-201ENST00000556806 195 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 AC079171.1-201ENST00000568788 914 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 MIR7703-201ENST00000620784 77 ntBASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC112Q8NEF3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 SNORA70.2-201ENST00000364506 135 ntBASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 AC019155.1-201ENST00000382242 574 ntBASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 DHFRP3-201ENST00000455595 559 ntBASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 UBA52P3-201ENST00000491303 382 ntBASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 AC010374.1-201ENST00000503762 1237 ntBASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 NCAPGP1-201ENST00000505112 1814 ntBASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms