Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 RNU5E-10P-201ENST00000363506 118 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 RNU6-236P-201ENST00000363886 106 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 MIR1303-201ENST00000408625 86 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 RPL12P34-201ENST00000424532 479 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 BX842559.2-201ENST00000451418 605 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 AC005912.1-201ENST00000495392 255 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 RNU6-415P-201ENST00000516252 97 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 RNA5SP392-201ENST00000516905 112 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 AC092709.1-201ENST00000521355 1045 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 OR7E13P-201ENST00000526052 910 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 ZNF971P-201ENST00000562068 1249 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 MIR4509-3-201ENST00000578671 94 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 AP005119.2-201ENST00000579735 1105 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 AC090312.2-201ENST00000582687 378 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 MIR4509-2-201ENST00000583920 94 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 KPNA2P3-201ENST00000584190 848 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 AC007497.1-201ENST00000610421 561 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 MIR4509-1-201ENST00000618224 94 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 OR4G3P-201ENST00000633500 913 ntBASIC5.31□□□□□ -1.56
HERC6Q8IVU3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
HERC6Q8IVU3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AP000756.2-201ENST00000624168 2567 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 ECM1P2-201ENST00000503354 1577 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC106754.1-201ENST00000562632 1513 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 RNA5SP388-201ENST00000362584 119 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC093719.1-202ENST00000392735 373 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 NCSTNP1-201ENST00000406229 144 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AL390316.1-201ENST00000406279 553 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 CDY14P-201ENST00000431260 1014 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 CDY12P-201ENST00000440679 1015 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 CDY13P-201ENST00000445813 1015 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 CDY23P-201ENST00000451661 1014 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC005229.2-201ENST00000456995 399 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 GTF2IP9-201ENST00000502460 301 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC093840.1-201ENST00000511599 336 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC026402.1-201ENST00000513642 170 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 RNU6-276P-201ENST00000516114 96 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 RNA5SP303-201ENST00000516192 130 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 RNA5SP464-201ENST00000516251 108 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC010306.1-201ENST00000523223 1117 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 OR8A2P-201ENST00000528631 952 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 LRRC6P1-201ENST00000532188 885 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 CYP2C60P-201ENST00000566088 139 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms