Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AL158152.1-201ENST00000602652 1435 ntBASIC5.45□□□□□ -1.54
SLC44A4Q53GD3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A4Q53GD3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A4Q53GD3 AL360270.2-201ENST00000562952 5985 ntBASIC5.45□□□□□ -1.54
SLC44A4Q53GD3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SLC44A4Q53GD3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.45□□□□□ -1.54
SLC44A4Q53GD3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SLC44A4Q53GD3 AC104446.1-201ENST00000613728 1321 ntBASIC5.45□□□□□ -1.54
SLC44A4Q53GD3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SLC44A4Q53GD3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A4Q53GD3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC000367.1-201ENST00000452711 1766 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 RNVU1-6-201ENST00000364688 164 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 RNA5SP87-201ENST00000384155 118 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AL079342.2-201ENST00000403367 482 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 RPP40P1-201ENST00000426762 456 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC091390.1-201ENST00000433904 331 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC002542.1-201ENST00000440683 193 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC104634.1-201ENST00000452720 462 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 RN7SL188P-201ENST00000469842 285 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC010486.2-201ENST00000505572 483 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC044913.1-201ENST00000557200 430 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC018552.1-201ENST00000562099 811 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 PIGPP4-201ENST00000584447 307 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AP001269.3-201ENST00000588718 329 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC015712.7-201ENST00000615211 635 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC092140.2-201ENST00000618027 521 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC087385.3-201ENST00000620477 187 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AC098679.4-201ENST00000624241 654 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 MIR7641-1-201ENST00000627518 61 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 OR4F13P-202ENST00000560066 2054 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 AP001642.1-201ENST00000624727 2117 ntBASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A4Q53GD3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 CASC19-206ENST00000641028 1430 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 RNU6-1214P-201ENST00000363650 109 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 RNA5SP455-201ENST00000365190 119 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 SNORA70.6-201ENST00000383934 134 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 RPS4XP9-201ENST00000405151 780 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AL590139.1-201ENST00000416267 400 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 OR2AM1P-201ENST00000422137 422 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 RIMKLBP2-201ENST00000424737 654 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 RPL7P56-201ENST00000429441 717 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 TPTE2P6-202ENST00000445572 1007 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 284.6 ms