Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 AC074101.1-201ENST00000637861 241 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 AL031119.1-201ENST00000404707 1879 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC38Q502W7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC38Q502W7 AC235565.1-201ENST00000456962 1325 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC114546.3-201ENST00000623582 1734 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC38Q502W7 RNU6-619P-201ENST00000365146 108 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC38Q502W7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC38Q502W7 SNORD116-12-201ENST00000384468 92 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 RPS24P12-201ENST00000402084 394 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC38Q502W7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AL139148.1-201ENST00000427122 680 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 RPL37P1-201ENST00000432310 284 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 CFL1P1-202ENST00000432948 411 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 AL035246.1-201ENST00000433554 1255 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 RPS20P1-201ENST00000434853 354 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 MRPL42P4-201ENST00000453267 443 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC010683.1-201ENST00000473673 378 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 SIAH1P1-201ENST00000479411 923 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 UBA52P7-201ENST00000486088 380 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 RPL30P11-201ENST00000495304 339 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC108693.1-201ENST00000496068 432 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC38Q502W7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 HIGD1AP6-201ENST00000521833 279 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC004217.3-201ENST00000551552 878 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 OR4U1P-201ENST00000554958 912 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 MIR4716-201ENST00000579628 84 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC007448.1-201ENST00000582714 234 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 FKBP1AP1-201ENST00000594588 318 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC069307.1-201ENST00000602820 447 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC093765.1-201ENST00000603758 881 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AP005137.2-201ENST00000609238 400 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 AL592148.2-201ENST00000612210 372 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC087821.2-201ENST00000637086 450 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC38Q502W7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC38Q502W7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 AL355852.1-201ENST00000454081 1771 ntBASIC5.24□□□□□ -1.57
CCDC38Q502W7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC38Q502W7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CCDC38Q502W7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC38Q502W7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC38Q502W7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 SALL4P2-201ENST00000423288 2910 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC38Q502W7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 RNU6-1151P-201ENST00000384684 107 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 U3.25-201ENST00000391209 220 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 SFR1P1-201ENST00000403720 688 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 HNRNPDP2-201ENST00000406475 478 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 OR3A2-201ENST00000408891 1076 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC007394.1-201ENST00000421941 531 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 EI24P4-201ENST00000423683 1078 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 RPF2P1-201ENST00000424137 906 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 COX6CP13-201ENST00000428703 226 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 AL121776.1-201ENST00000429337 372 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms