Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.82□□□□□ -1.64
LIMK1P53667 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
LIMK1P53667 OR10J6P-201ENST00000289731 930 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 RNA5SP509-201ENST00000364577 119 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 AL359837.1-201ENST00000381357 287 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 RNU6-185P-201ENST00000384421 107 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 OR6C69P-201ENST00000394268 893 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 AC025750.1-201ENST00000399891 379 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 LINC01881-201ENST00000416103 412 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 MTCO3P4-201ENST00000419236 787 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 OR2AH1P-201ENST00000425717 928 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 AL451062.2-201ENST00000427515 271 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.82□□□□□ -1.64
LIMK1P53667 BX323845.1-201ENST00000432417 179 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.82□□□□□ -1.64
LIMK1P53667 RNFT1P2-201ENST00000443064 757 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 RPL7AP61-201ENST00000443410 636 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK1P53667 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.82□□□□□ -1.64
LIMK1P53667 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.82□□□□□ -1.64
LIMK1P53667 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.82□□□□□ -1.64
LIMK1P53667 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.82□□□□□ -1.64
LIMK1P53667 SNORA31.13-201ENST00000516624 135 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.82□□□□□ -1.64
LIMK1P53667 MED28P5-201ENST00000528254 438 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LIMK1P53667 AC113192.3-201ENST00000529152 742 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.82□□□□□ -1.64
LIMK1P53667 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.82□□□□□ -1.64
LIMK1P53667 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.82□□□□□ -1.64
LIMK1P53667 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK1P53667 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.82□□□□□ -1.64
LIMK1P53667 AC011477.5-201ENST00000586571 259 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 AC245389.1-201ENST00000605141 529 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 BNIP3P19-201ENST00000605397 577 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.82□□□□□ -1.64
LIMK1P53667 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK1P53667 AP000648.2-201ENST00000624182 404 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 AC106730.3-201ENST00000624568 641 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 AC097372.4-201ENST00000625025 466 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.82□□□□□ -1.64
LIMK1P53667 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.82□□□□□ -1.64
LIMK1P53667 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK1P53667 AL360270.2-201ENST00000562952 5985 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK1P53667 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LIMK1P53667 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK1P53667 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK1P53667 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK1P53667 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK1P53667 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LIMK1P53667 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.81□□□□□ -1.64
LIMK1P53667 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.81□□□□□ -1.64
LIMK1P53667 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK1P53667 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK1P53667 RNU6-792P-201ENST00000363490 107 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 RNU6-609P-201ENST00000365459 107 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK1P53667 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK1P53667 ATP5F1P6-201ENST00000402768 767 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LIMK1P53667 SNORA77-201ENST00000408716 125 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.81□□□□□ -1.64
LIMK1P53667 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.81□□□□□ -1.64
LIMK1P53667 AC006946.1-201ENST00000429106 328 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 RPS24P8-201ENST00000431490 402 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 PPIAP13-201ENST00000434706 478 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.81□□□□□ -1.64
LIMK1P53667 RPS29P9-201ENST00000440360 171 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 RPS27P5-201ENST00000444247 244 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.81□□□□□ -1.64
LIMK1P53667 AC011276.1-201ENST00000469688 323 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.81□□□□□ -1.64
LIMK1P53667 HMGB1P19-201ENST00000517578 577 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 UBTFL9-201ENST00000534504 1148 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK1P53667 AC090079.2-201ENST00000575289 768 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK1P53667 HMGB2P1-201ENST00000591146 634 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.81□□□□□ -1.64
LIMK1P53667 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.81□□□□□ -1.64
LIMK1P53667 ABI1P1-201ENST00000603375 1120 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 AC005034.4-201ENST00000603612 899 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 AC018618.2-201ENST00000604770 446 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.81□□□□□ -1.64
LIMK1P53667 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.81□□□□□ -1.64
LIMK1P53667 AC023043.4-201ENST00000612081 449 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 AL121890.3-201ENST00000618494 516 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 AC067852.7-201ENST00000623270 535 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 AC011815.3-201ENST00000624194 473 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK1P53667 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
LIMK1P53667 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
LIMK1P53667 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.81□□□□□ -1.64
LIMK1P53667 AC017104.4-201ENST00000636283 1592 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LIMK1P53667 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK1P53667 AC006210.2-201ENST00000367074 1545 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LIMK1P53667 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms