Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.28□□□□□ -1.56
COPB1P53618 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.28□□□□□ -1.56
COPB1P53618 RNU4-51P-201ENST00000364206 140 ntBASIC5.28□□□□□ -1.56
COPB1P53618 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COPB1P53618 SNORD96B-201ENST00000386148 79 ntBASIC5.28□□□□□ -1.56
COPB1P53618 MT-TP-201ENST00000387461 68 ntBASIC5.28□□□□□ -1.56
COPB1P53618 AL136310.1-201ENST00000404926 654 ntBASIC5.28□□□□□ -1.56
COPB1P53618 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.28□□□□□ -1.56
COPB1P53618 RPL7P57-201ENST00000423238 740 ntBASIC5.28□□□□□ -1.56
COPB1P53618 AC093716.1-201ENST00000435923 377 ntBASIC5.28□□□□□ -1.56
COPB1P53618 CNOT7P2-201ENST00000441051 832 ntBASIC5.28□□□□□ -1.56
COPB1P53618 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.28□□□□□ -1.56
COPB1P53618 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COPB1P53618 CALM1P2-201ENST00000452941 448 ntBASIC5.28□□□□□ -1.56
COPB1P53618 RPS6P2-201ENST00000454208 705 ntBASIC5.28□□□□□ -1.56
COPB1P53618 RPL23AP56-201ENST00000460778 453 ntBASIC5.28□□□□□ -1.56
COPB1P53618 AC090114.3-201ENST00000479267 829 ntBASIC5.28□□□□□ -1.56
COPB1P53618 RPL23AP37-201ENST00000479658 549 ntBASIC5.28□□□□□ -1.56
COPB1P53618 RN7SL727P-201ENST00000482164 296 ntBASIC5.28□□□□□ -1.56
COPB1P53618 AC093270.2-201ENST00000486157 792 ntBASIC5.28□□□□□ -1.56
COPB1P53618 AC079203.1-201ENST00000487972 404 ntBASIC5.28□□□□□ -1.56
COPB1P53618 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.28□□□□□ -1.56
COPB1P53618 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.28□□□□□ -1.56
COPB1P53618 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.28□□□□□ -1.56
COPB1P53618 AC104417.1-201ENST00000523974 751 ntBASIC5.28□□□□□ -1.56
COPB1P53618 AC022832.1-201ENST00000530718 645 ntBASIC5.28□□□□□ -1.56
COPB1P53618 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.28□□□□□ -1.56
COPB1P53618 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
COPB1P53618 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.28□□□□□ -1.56
COPB1P53618 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.28□□□□□ -1.56
COPB1P53618 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.28□□□□□ -1.56
COPB1P53618 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.28□□□□□ -1.56
COPB1P53618 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.28□□□□□ -1.56
COPB1P53618 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.28□□□□□ -1.56
COPB1P53618 AC010975.3-201ENST00000618727 978 ntBASIC5.28□□□□□ -1.56
COPB1P53618 AC013470.4-201ENST00000619978 986 ntBASIC5.28□□□□□ -1.56
COPB1P53618 AL512506.2-201ENST00000624472 458 ntBASIC5.28□□□□□ -1.56
COPB1P53618 AL353662.3-201ENST00000625131 237 ntBASIC5.28□□□□□ -1.56
COPB1P53618 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
COPB1P53618 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.28□□□□□ -1.56
COPB1P53618 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COPB1P53618 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COPB1P53618 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.28□□□□□ -1.56
COPB1P53618 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COPB1P53618 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.28□□□□□ -1.56
COPB1P53618 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
COPB1P53618 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.27□□□□□ -1.57
COPB1P53618 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.27□□□□□ -1.57
COPB1P53618 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 Y_RNA.472-201ENST00000384322 102 ntBASIC5.27□□□□□ -1.57
COPB1P53618 SNORD116-12-201ENST00000384468 92 ntBASIC5.27□□□□□ -1.57
COPB1P53618 RNU6-636P-201ENST00000384598 107 ntBASIC5.27□□□□□ -1.57
COPB1P53618 SNORD65C-201ENST00000390962 71 ntBASIC5.27□□□□□ -1.57
COPB1P53618 AL645733.1-201ENST00000402250 217 ntBASIC5.27□□□□□ -1.57
COPB1P53618 HMGB3P31-201ENST00000413333 595 ntBASIC5.27□□□□□ -1.57
COPB1P53618 RPS7P9-201ENST00000414704 586 ntBASIC5.27□□□□□ -1.57
COPB1P53618 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.27□□□□□ -1.57
COPB1P53618 SOCS5P3-201ENST00000425115 1576 ntBASIC5.27□□□□□ -1.57
COPB1P53618 USP9YP11-201ENST00000427537 717 ntBASIC5.27□□□□□ -1.57
COPB1P53618 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.27□□□□□ -1.57
COPB1P53618 EEF1B2P5-201ENST00000444820 548 ntBASIC5.27□□□□□ -1.57
COPB1P53618 Z80107.2-201ENST00000445127 392 ntBASIC5.27□□□□□ -1.57
COPB1P53618 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.27□□□□□ -1.57
COPB1P53618 OR51B8P-201ENST00000449892 769 ntBASIC5.27□□□□□ -1.57
COPB1P53618 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.27□□□□□ -1.57
COPB1P53618 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.27□□□□□ -1.57
COPB1P53618 AC005532.2-201ENST00000467154 373 ntBASIC5.27□□□□□ -1.57
COPB1P53618 PRDX3P4-201ENST00000470828 747 ntBASIC5.27□□□□□ -1.57
COPB1P53618 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.27□□□□□ -1.57
COPB1P53618 RN7SL319P-201ENST00000480656 221 ntBASIC5.27□□□□□ -1.57
COPB1P53618 RPSAP50-201ENST00000481955 852 ntBASIC5.27□□□□□ -1.57
COPB1P53618 AC011037.1-201ENST00000483964 558 ntBASIC5.27□□□□□ -1.57
COPB1P53618 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.27□□□□□ -1.57
COPB1P53618 NDUFA5P12-201ENST00000503796 343 ntBASIC5.27□□□□□ -1.57
COPB1P53618 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.27□□□□□ -1.57
COPB1P53618 AC008837.1-201ENST00000511513 412 ntBASIC5.27□□□□□ -1.57
COPB1P53618 AC092593.2-201ENST00000513866 913 ntBASIC5.27□□□□□ -1.57
COPB1P53618 Y_RNA.688-201ENST00000516565 95 ntBASIC5.27□□□□□ -1.57
COPB1P53618 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.27□□□□□ -1.57
COPB1P53618 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.27□□□□□ -1.57
COPB1P53618 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.27□□□□□ -1.57
COPB1P53618 AL049870.4-201ENST00000555741 486 ntBASIC5.27□□□□□ -1.57
COPB1P53618 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.27□□□□□ -1.57
COPB1P53618 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.27□□□□□ -1.57
COPB1P53618 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
COPB1P53618 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.27□□□□□ -1.57
COPB1P53618 AC069304.3-201ENST00000603938 1084 ntBASIC5.27□□□□□ -1.57
COPB1P53618 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 AL139407.1-201ENST00000613826 1175 ntBASIC5.27□□□□□ -1.57
COPB1P53618 AC234782.5-201ENST00000617723 324 ntBASIC5.27□□□□□ -1.57
COPB1P53618 AC078883.4-201ENST00000623218 367 ntBASIC5.27□□□□□ -1.57
COPB1P53618 AC017037.3-201ENST00000625016 472 ntBASIC5.27□□□□□ -1.57
COPB1P53618 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms