Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.06□□□□□ -1.28
RXRBP28702 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.06□□□□□ -1.28
RXRBP28702 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC7.06□□□□□ -1.28
RXRBP28702 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
RXRBP28702 AP000547.3-204ENST00000588548 2523 ntBASIC7.06□□□□□ -1.28
RXRBP28702 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RXRBP28702 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.06□□□□□ -1.28
RXRBP28702 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RXRBP28702 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.06□□□□□ -1.28
RXRBP28702 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.06□□□□□ -1.28
RXRBP28702 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
RXRBP28702 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RXRBP28702 AC140479.2-201ENST00000421567 3130 ntBASIC7.05□□□□□ -1.28
RXRBP28702 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC7.05□□□□□ -1.28
RXRBP28702 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RXRBP28702 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
RXRBP28702 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RXRBP28702 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.05□□□□□ -1.28
RXRBP28702 PARP4P1-201ENST00000435945 2337 ntBASIC7.05□□□□□ -1.28
RXRBP28702 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC7.05□□□□□ -1.28
RXRBP28702 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RXRBP28702 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RXRBP28702 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
RXRBP28702 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
RXRBP28702 MIR365B-201ENST00000362317 111 ntBASIC7.05□□□□□ -1.28
RXRBP28702 RNU6-697P-201ENST00000363348 107 ntBASIC7.05□□□□□ -1.28
RXRBP28702 SNORA70.4-201ENST00000365509 134 ntBASIC7.05□□□□□ -1.28
RXRBP28702 RNU6-1200P-201ENST00000384162 107 ntBASIC7.05□□□□□ -1.28
RXRBP28702 RNU6-1011P-201ENST00000384668 107 ntBASIC7.05□□□□□ -1.28
RXRBP28702 HSPA8P15-201ENST00000401676 786 ntBASIC7.05□□□□□ -1.28
RXRBP28702 SNORA11.1-201ENST00000408133 129 ntBASIC7.05□□□□□ -1.28
RXRBP28702 OR4K6P-201ENST00000416478 897 ntBASIC7.05□□□□□ -1.28
RXRBP28702 AC006065.1-201ENST00000422539 802 ntBASIC7.05□□□□□ -1.28
RXRBP28702 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC7.05□□□□□ -1.28
RXRBP28702 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC7.05□□□□□ -1.28
RXRBP28702 COX6CP2-201ENST00000444980 225 ntBASIC7.05□□□□□ -1.28
RXRBP28702 AC007327.1-201ENST00000447461 264 ntBASIC7.05□□□□□ -1.28
RXRBP28702 AC010618.1-201ENST00000469924 477 ntBASIC7.05□□□□□ -1.28
RXRBP28702 HMGN1P10-201ENST00000474557 553 ntBASIC7.05□□□□□ -1.28
RXRBP28702 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC7.05□□□□□ -1.28
RXRBP28702 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC7.05□□□□□ -1.28
RXRBP28702 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC7.05□□□□□ -1.28
RXRBP28702 AC117522.1-201ENST00000509821 380 ntBASIC7.05□□□□□ -1.28
RXRBP28702 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC7.05□□□□□ -1.28
RXRBP28702 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC7.05□□□□□ -1.28
RXRBP28702 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
RXRBP28702 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC7.05□□□□□ -1.28
RXRBP28702 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC7.05□□□□□ -1.28
RXRBP28702 AC116553.2-201ENST00000564203 463 ntBASIC7.05□□□□□ -1.28
RXRBP28702 MIR132-201ENST00000591554 101 ntBASIC7.05□□□□□ -1.28
RXRBP28702 AC009237.13-201ENST00000603193 276 ntBASIC7.05□□□□□ -1.28
RXRBP28702 C8orf59P2-201ENST00000603441 271 ntBASIC7.05□□□□□ -1.28
RXRBP28702 AC091805.2-201ENST00000603848 235 ntBASIC7.05□□□□□ -1.28
RXRBP28702 AL356218.2-201ENST00000605264 187 ntBASIC7.05□□□□□ -1.28
RXRBP28702 AL391497.1-201ENST00000608671 547 ntBASIC7.05□□□□□ -1.28
RXRBP28702 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.05□□□□□ -1.28
RXRBP28702 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RXRBP28702 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.05□□□□□ -1.28
RXRBP28702 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RXRBP28702 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
RXRBP28702 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.05□□□□□ -1.28
RXRBP28702 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RXRBP28702 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RXRBP28702 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RXRBP28702 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RXRBP28702 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RXRBP28702 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RXRBP28702 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RXRBP28702 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RXRBP28702 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.04□□□□□ -1.28
RXRBP28702 AC017104.4-201ENST00000636283 1592 ntBASIC7.04□□□□□ -1.28
RXRBP28702 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RXRBP28702 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RXRBP28702 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.04□□□□□ -1.28
RXRBP28702 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RXRBP28702 IGKV7-3-201ENST00000357453 298 ntBASIC7.04□□□□□ -1.28
RXRBP28702 Y_RNA.61-201ENST00000362835 102 ntBASIC7.04□□□□□ -1.28
RXRBP28702 Y_RNA.192-201ENST00000363977 102 ntBASIC7.04□□□□□ -1.28
RXRBP28702 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RXRBP28702 MTCO3P31-201ENST00000405526 789 ntBASIC7.04□□□□□ -1.28
RXRBP28702 BTF3P7-201ENST00000407097 488 ntBASIC7.04□□□□□ -1.28
RXRBP28702 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RXRBP28702 RNU2-41P-201ENST00000410991 178 ntBASIC7.04□□□□□ -1.28
RXRBP28702 HMGN1P14-201ENST00000412459 517 ntBASIC7.04□□□□□ -1.28
RXRBP28702 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.04□□□□□ -1.28
RXRBP28702 AC007562.1-201ENST00000421819 517 ntBASIC7.04□□□□□ -1.28
RXRBP28702 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC7.04□□□□□ -1.28
RXRBP28702 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.04□□□□□ -1.28
RXRBP28702 AC007559.1-201ENST00000428736 355 ntBASIC7.04□□□□□ -1.28
RXRBP28702 RPL12P17-201ENST00000432393 498 ntBASIC7.04□□□□□ -1.28
RXRBP28702 MTND4LP16-201ENST00000440828 295 ntBASIC7.04□□□□□ -1.28
RXRBP28702 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.04□□□□□ -1.28
RXRBP28702 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.04□□□□□ -1.28
RXRBP28702 AC023274.2-201ENST00000445264 521 ntBASIC7.04□□□□□ -1.28
RXRBP28702 KNOP1P3-201ENST00000446933 426 ntBASIC7.04□□□□□ -1.28
RXRBP28702 MEMO1P4-201ENST00000453590 386 ntBASIC7.04□□□□□ -1.28
RXRBP28702 RPL31P58-201ENST00000469001 379 ntBASIC7.04□□□□□ -1.28
RXRBP28702 OR4G11P-201ENST00000492842 939 ntBASIC7.04□□□□□ -1.28
RXRBP28702 RN7SL244P-201ENST00000493405 297 ntBASIC7.04□□□□□ -1.28
RXRBP28702 BNIP3P41-201ENST00000503774 571 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms