Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.81□□□□□ -1.32
ERCC3P19447 OR5BE1P-202ENST00000641168 1176 ntBASIC6.81□□□□□ -1.32
ERCC3P19447 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
ERCC3P19447 AC022164.1-201ENST00000568767 2673 ntBASIC6.81□□□□□ -1.32
ERCC3P19447 AC025470.1-201ENST00000510053 2032 ntBASIC6.81□□□□□ -1.32
ERCC3P19447 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
ERCC3P19447 MTND5P29-201ENST00000458676 1807 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC3P19447 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC3P19447 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC3P19447 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC3P19447 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.8□□□□□ -1.32
ERCC3P19447 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC3P19447 DEFB108C-201ENST00000400154 252 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 PEX12P1-201ENST00000400284 1048 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.8□□□□□ -1.32
ERCC3P19447 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC3P19447 BMS1P17-202ENST00000416720 316 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.8□□□□□ -1.32
ERCC3P19447 AL365184.2-201ENST00000431139 435 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.8□□□□□ -1.32
ERCC3P19447 VN1R10P-201ENST00000447106 875 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.8□□□□□ -1.32
ERCC3P19447 AL645937.3-201ENST00000453647 936 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 MEMO1P3-201ENST00000459811 302 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 RPS23P6-201ENST00000466136 431 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC6.8□□□□□ -1.32
ERCC3P19447 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC3P19447 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.8□□□□□ -1.32
ERCC3P19447 AC135352.1-201ENST00000506173 1418 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.8□□□□□ -1.32
ERCC3P19447 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.8□□□□□ -1.32
ERCC3P19447 IGKV2-18-201ENST00000522607 343 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 OR4A45P-201ENST00000529954 901 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC6.8□□□□□ -1.32
ERCC3P19447 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.8□□□□□ -1.32
ERCC3P19447 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC3P19447 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.8□□□□□ -1.32
ERCC3P19447 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.8□□□□□ -1.32
ERCC3P19447 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC3P19447 MTND1P15-201ENST00000579262 949 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 NF1P5-201ENST00000588287 448 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.8□□□□□ -1.32
ERCC3P19447 SDR42E1P1-201ENST00000611327 477 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 AC073968.1-201ENST00000618594 637 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC3P19447 AC092692.1-201ENST00000623625 2595 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 AL031985.3-201ENST00000565390 2449 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
ERCC3P19447 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
ERCC3P19447 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC3P19447 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC3P19447 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC3P19447 PANDAR-201ENST00000629595 1506 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC3P19447 AC093849.1-201ENST00000563631 2209 ntBASIC6.8□□□□□ -1.32
ERCC3P19447 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC3P19447 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
ERCC3P19447 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC3P19447 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC3P19447 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC3P19447 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC3P19447 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC3P19447 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC3P19447 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
ERCC3P19447 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC3P19447 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC3P19447 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC3P19447 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC3P19447 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC3P19447 RNU1-149P-201ENST00000390870 161 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
ERCC3P19447 AL078604.1-201ENST00000404609 466 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 RNU2-16P-201ENST00000410712 136 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 RN7SKP29-201ENST00000410957 272 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AC109780.2-201ENST00000413467 845 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 CDK8P2-201ENST00000415020 547 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC3P19447 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.79□□□□□ -1.32
ERCC3P19447 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC6.79□□□□□ -1.32
ERCC3P19447 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.79□□□□□ -1.32
ERCC3P19447 RPL36P19-201ENST00000430744 301 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 FMO7P-201ENST00000436045 768 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC3P19447 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.79□□□□□ -1.32
ERCC3P19447 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 EEF1B2P6-201ENST00000445713 673 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.79□□□□□ -1.32
ERCC3P19447 EEF1E1P1-201ENST00000446998 430 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.79□□□□□ -1.32
ERCC3P19447 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AC090602.1-201ENST00000469695 252 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC3P19447 KLRA1P-201ENST00000503499 986 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC3P19447 DUTP7-201ENST00000507982 486 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.79□□□□□ -1.32
ERCC3P19447 SNORA70.11-201ENST00000515987 138 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 SNORA70.13-201ENST00000516116 138 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms