Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 BMS1P21-201ENST00000634565 365 ntBASIC4.38□□□□□ -1.71
XRCC1P18887 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.38□□□□□ -1.71
XRCC1P18887 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.38□□□□□ -1.71
XRCC1P18887 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
XRCC1P18887 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.38□□□□□ -1.71
XRCC1P18887 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
XRCC1P18887 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.38□□□□□ -1.71
XRCC1P18887 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.38□□□□□ -1.71
XRCC1P18887 AL133243.3-201ENST00000617415 3004 ntBASIC4.38□□□□□ -1.71
XRCC1P18887 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
XRCC1P18887 AC105074.1-201ENST00000623380 3095 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.37□□□□□ -1.71
XRCC1P18887 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
XRCC1P18887 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
XRCC1P18887 CASC19-284ENST00000642142 1868 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
XRCC1P18887 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.37□□□□□ -1.71
XRCC1P18887 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
XRCC1P18887 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
XRCC1P18887 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
XRCC1P18887 RNA5SP509-201ENST00000364577 119 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 AL034374.1-201ENST00000406329 351 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 FCF1P5-201ENST00000406490 482 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 RPL26P37-201ENST00000411983 438 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 TMSB10P2-201ENST00000416049 131 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 AL590609.2-201ENST00000421430 368 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 AC011998.1-201ENST00000433403 117 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
XRCC1P18887 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.37□□□□□ -1.71
XRCC1P18887 AC069285.2-201ENST00000440210 275 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 AL353898.1-201ENST00000444055 238 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 AL157827.1-201ENST00000447622 132 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.37□□□□□ -1.71
XRCC1P18887 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.37□□□□□ -1.71
XRCC1P18887 TPT1P12-201ENST00000448968 492 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
XRCC1P18887 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
XRCC1P18887 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.37□□□□□ -1.71
XRCC1P18887 RPL10P17-201ENST00000453852 316 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 AC011276.1-201ENST00000469688 323 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 RNU6-889P-201ENST00000517189 103 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 AC103792.1-201ENST00000603591 919 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 AL139395.1-201ENST00000603662 160 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 AC083809.1-201ENST00000615051 472 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 AL138721.1-201ENST00000616756 179 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.37□□□□□ -1.71
XRCC1P18887 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
XRCC1P18887 AC091905.2-201ENST00000623143 306 ntBASIC4.37□□□□□ -1.71
XRCC1P18887 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
XRCC1P18887 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
XRCC1P18887 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
XRCC1P18887 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
XRCC1P18887 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.37□□□□□ -1.71
XRCC1P18887 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
XRCC1P18887 AC017002.4-201ENST00000604721 1525 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
XRCC1P18887 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
XRCC1P18887 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
XRCC1P18887 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
XRCC1P18887 OR4K17-201ENST00000315543 1032 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 MTND3P20-201ENST00000407663 186 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 P2RY10P2-201ENST00000416730 913 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 CHIAP3-201ENST00000423668 1133 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.36□□□□□ -1.71
XRCC1P18887 RPS29P17-201ENST00000430795 166 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 AC073143.1-201ENST00000436316 395 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 MTCYBP12-201ENST00000440559 1134 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.36□□□□□ -1.71
XRCC1P18887 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.36□□□□□ -1.71
XRCC1P18887 AC079804.1-201ENST00000461922 436 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.36□□□□□ -1.71
XRCC1P18887 RN7SL385P-201ENST00000468873 276 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 AC026979.1-201ENST00000492525 396 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.36□□□□□ -1.71
XRCC1P18887 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.36□□□□□ -1.71
XRCC1P18887 IGKV2D-10-201ENST00000520194 281 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 IFITM8P-201ENST00000522529 394 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.36□□□□□ -1.71
XRCC1P18887 OR8G5-201ENST00000524943 1041 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 NPM1P35-201ENST00000533043 868 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.36□□□□□ -1.71
XRCC1P18887 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.36□□□□□ -1.71
XRCC1P18887 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.36□□□□□ -1.71
XRCC1P18887 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.36□□□□□ -1.71
XRCC1P18887 AC090181.2-201ENST00000602975 672 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 AL445423.1-201ENST00000609941 536 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 AL121890.3-201ENST00000618494 516 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 MIR6758-201ENST00000620653 63 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.36□□□□□ -1.71
XRCC1P18887 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
XRCC1P18887 OR2L1P-202ENST00000641567 1023 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
XRCC1P18887 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
XRCC1P18887 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
XRCC1P18887 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.36□□□□□ -1.71
XRCC1P18887 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.36□□□□□ -1.71
XRCC1P18887 MTND4P26-201ENST00000415971 1359 ntBASIC4.36□□□□□ -1.71
XRCC1P18887 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.36□□□□□ -1.71
XRCC1P18887 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.36□□□□□ -1.71
XRCC1P18887 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms