Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CXCL1P09341 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CXCL1P09341 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CXCL1P09341 OTUD4P1-201ENST00000237841 3067 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CXCL1P09341 AC007685.1-201ENST00000329806 452 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 RN7SKP149-201ENST00000363008 344 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 MIR184-201ENST00000384962 84 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CXCL1P09341 RNA5SP397-201ENST00000391323 118 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CXCL1P09341 COX6B1P1-201ENST00000415962 213 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 DPY19L1P2-201ENST00000426647 915 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.19□□□□□ -1.9
CXCL1P09341 RBMY2QP-201ENST00000429799 1147 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.19□□□□□ -1.9
CXCL1P09341 AC245517.2-201ENST00000442890 346 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.19□□□□□ -1.9
CXCL1P09341 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.19□□□□□ -1.9
CXCL1P09341 AL162591.2-201ENST00000449634 317 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 HMGB3P8-201ENST00000449709 577 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 AL136097.1-201ENST00000456945 913 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 S100A11P1-201ENST00000477525 312 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 AC104109.1-201ENST00000498563 436 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.19□□□□□ -1.9
CXCL1P09341 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.19□□□□□ -1.9
CXCL1P09341 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.19□□□□□ -1.9
CXCL1P09341 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.19□□□□□ -1.9
CXCL1P09341 PDCL2P2-201ENST00000533651 189 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.19□□□□□ -1.9
CXCL1P09341 AC006064.5-201ENST00000541782 248 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.19□□□□□ -1.9
CXCL1P09341 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.19□□□□□ -1.9
CXCL1P09341 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.19□□□□□ -1.9
CXCL1P09341 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.19□□□□□ -1.9
CXCL1P09341 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.19□□□□□ -1.9
CXCL1P09341 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.19□□□□□ -1.9
CXCL1P09341 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.19□□□□□ -1.9
CXCL1P09341 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.19□□□□□ -1.9
CXCL1P09341 AC073091.2-201ENST00000603205 907 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.19□□□□□ -1.9
CXCL1P09341 OR6R2P-201ENST00000609216 300 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 AC092628.2-201ENST00000622492 339 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.19□□□□□ -1.9
CXCL1P09341 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.19□□□□□ -1.9
CXCL1P09341 OR10AB1P-202ENST00000641219 1686 ntBASIC3.19□□□□□ -1.9
CXCL1P09341 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CXCL1P09341 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CXCL1P09341 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.19□□□□□ -1.9
CXCL1P09341 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CXCL1P09341 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CXCL1P09341 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CXCL1P09341 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.18□□□□□ -1.9
CXCL1P09341 ERCC6-202ENST00000374127 1782 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CXCL1P09341 RNA5SP123-201ENST00000363244 119 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 RNU6-1331P-201ENST00000363658 106 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL1P09341 RNA5SP105-201ENST00000391123 113 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 AL590704.1-201ENST00000402856 794 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.18□□□□□ -1.9
CXCL1P09341 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.18□□□□□ -1.9
CXCL1P09341 RPL37P18-201ENST00000411602 243 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.18□□□□□ -1.9
CXCL1P09341 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL1P09341 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL1P09341 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.18□□□□□ -1.9
CXCL1P09341 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.18□□□□□ -1.9
CXCL1P09341 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL1P09341 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CXCL1P09341 SKP1P1-201ENST00000438081 489 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 AC092809.1-201ENST00000441469 474 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL1P09341 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.18□□□□□ -1.9
CXCL1P09341 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL1P09341 RPL35AP15-201ENST00000468042 339 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 RPL23AP14-201ENST00000468281 468 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 RPL7P16-201ENST00000479738 738 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 RPL7P47-201ENST00000497299 556 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL1P09341 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.18□□□□□ -1.9
CXCL1P09341 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.18□□□□□ -1.9
CXCL1P09341 RPL7L1P4-201ENST00000513004 707 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL1P09341 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL1P09341 SNORA70.14-201ENST00000516205 110 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.18□□□□□ -1.9
CXCL1P09341 IGKV3D-34-201ENST00000522638 302 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 AC063950.1-201ENST00000552036 308 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 AL109766.1-201ENST00000555080 552 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.18□□□□□ -1.9
CXCL1P09341 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL1P09341 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL1P09341 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
CXCL1P09341 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.18□□□□□ -1.9
CXCL1P09341 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL1P09341 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL1P09341 AC079587.1-201ENST00000603846 277 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 RNVU1-4-201ENST00000612985 164 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 AL356274.1-201ENST00000617064 410 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms