Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AL512326.1-201ENST00000443050 721 ntBASIC3.79□□□□□ -1.8
APOC1P02654 RPL7L1P8-201ENST00000469911 741 ntBASIC3.79□□□□□ -1.8
APOC1P02654 AC087385.1-201ENST00000475062 312 ntBASIC3.79□□□□□ -1.8
APOC1P02654 AC105233.1-201ENST00000498840 781 ntBASIC3.79□□□□□ -1.8
APOC1P02654 NDUFB4P9-201ENST00000511646 388 ntBASIC3.79□□□□□ -1.8
APOC1P02654 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
APOC1P02654 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.79□□□□□ -1.8
APOC1P02654 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.79□□□□□ -1.8
APOC1P02654 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.79□□□□□ -1.8
APOC1P02654 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.79□□□□□ -1.8
APOC1P02654 AC115286.1-201ENST00000604298 434 ntBASIC3.79□□□□□ -1.8
APOC1P02654 AC023043.4-201ENST00000612081 449 ntBASIC3.79□□□□□ -1.8
APOC1P02654 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
APOC1P02654 AL391261.4-201ENST00000616012 481 ntBASIC3.79□□□□□ -1.8
APOC1P02654 AP001784.1-201ENST00000624107 428 ntBASIC3.79□□□□□ -1.8
APOC1P02654 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
APOC1P02654 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.79□□□□□ -1.8
APOC1P02654 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
APOC1P02654 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
APOC1P02654 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
APOC1P02654 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
APOC1P02654 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
APOC1P02654 RPS4XP5-202ENST00000449995 1334 ntBASIC3.78□□□□□ -1.8
APOC1P02654 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
APOC1P02654 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.78□□□□□ -1.8
APOC1P02654 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOC1P02654 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
APOC1P02654 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.78□□□□□ -1.8
APOC1P02654 MIR659-201ENST00000384963 97 ntBASIC3.78□□□□□ -1.8
APOC1P02654 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
APOC1P02654 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
APOC1P02654 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
APOC1P02654 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.78□□□□□ -1.8
APOC1P02654 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOC1P02654 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.78□□□□□ -1.8
APOC1P02654 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.78□□□□□ -1.8
APOC1P02654 AL356387.2-201ENST00000422272 243 ntBASIC3.78□□□□□ -1.8
APOC1P02654 RPL7AP25-201ENST00000423357 805 ntBASIC3.78□□□□□ -1.8
APOC1P02654 MTND4LP13-201ENST00000425022 298 ntBASIC3.78□□□□□ -1.8
APOC1P02654 AL590762.4-201ENST00000425885 253 ntBASIC3.78□□□□□ -1.8
APOC1P02654 HMGB3P5-201ENST00000428894 612 ntBASIC3.78□□□□□ -1.8
APOC1P02654 HSPE1P27-201ENST00000430808 296 ntBASIC3.78□□□□□ -1.8
APOC1P02654 RPS26P40-201ENST00000435209 294 ntBASIC3.78□□□□□ -1.8
APOC1P02654 TXNP2-201ENST00000443918 295 ntBASIC3.78□□□□□ -1.8
APOC1P02654 RPL36AP15-201ENST00000444514 266 ntBASIC3.78□□□□□ -1.8
APOC1P02654 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.78□□□□□ -1.8
APOC1P02654 AC073264.2-201ENST00000448886 166 ntBASIC3.78□□□□□ -1.8
APOC1P02654 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.78□□□□□ -1.8
APOC1P02654 DHFRP3-201ENST00000455595 559 ntBASIC3.78□□□□□ -1.8
APOC1P02654 RNU7-170P-201ENST00000459303 61 ntBASIC3.78□□□□□ -1.8
APOC1P02654 RPL35AP15-201ENST00000468042 339 ntBASIC3.78□□□□□ -1.8
APOC1P02654 RN7SL826P-201ENST00000479724 288 ntBASIC3.78□□□□□ -1.8
APOC1P02654 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.78□□□□□ -1.8
APOC1P02654 AC017037.1-201ENST00000508460 471 ntBASIC3.78□□□□□ -1.8
APOC1P02654 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.78□□□□□ -1.8
APOC1P02654 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.78□□□□□ -1.8
APOC1P02654 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.78□□□□□ -1.8
APOC1P02654 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.78□□□□□ -1.8
APOC1P02654 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.78□□□□□ -1.8
APOC1P02654 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.78□□□□□ -1.8
APOC1P02654 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.78□□□□□ -1.8
APOC1P02654 AC084757.1-201ENST00000559987 490 ntBASIC3.78□□□□□ -1.8
APOC1P02654 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.78□□□□□ -1.8
APOC1P02654 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.78□□□□□ -1.8
APOC1P02654 AC068790.7-201ENST00000602347 528 ntBASIC3.78□□□□□ -1.8
APOC1P02654 AL031666.3-201ENST00000609320 1006 ntBASIC3.78□□□□□ -1.8
APOC1P02654 U7.8-201ENST00000619968 63 ntBASIC3.78□□□□□ -1.8
APOC1P02654 AL136964.1-201ENST00000622038 2990 ntBASIC3.78□□□□□ -1.8
APOC1P02654 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.78□□□□□ -1.8
APOC1P02654 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
APOC1P02654 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOC1P02654 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOC1P02654 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
APOC1P02654 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
APOC1P02654 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOC1P02654 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOC1P02654 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOC1P02654 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOC1P02654 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOC1P02654 RNU6-146P-201ENST00000384602 108 ntBASIC3.77□□□□□ -1.81
APOC1P02654 RPS16P5-201ENST00000406501 404 ntBASIC3.77□□□□□ -1.81
APOC1P02654 SNRPFP1-201ENST00000414761 252 ntBASIC3.77□□□□□ -1.81
APOC1P02654 RPL12P34-201ENST00000424532 479 ntBASIC3.77□□□□□ -1.81
APOC1P02654 NFYAP1-201ENST00000431953 972 ntBASIC3.77□□□□□ -1.81
APOC1P02654 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.77□□□□□ -1.81
APOC1P02654 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.77□□□□□ -1.81
APOC1P02654 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.77□□□□□ -1.81
APOC1P02654 RPL23AP81-201ENST00000455252 467 ntBASIC3.77□□□□□ -1.81
APOC1P02654 AL136097.1-201ENST00000456945 913 ntBASIC3.77□□□□□ -1.81
APOC1P02654 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
APOC1P02654 RPL7P47-201ENST00000497299 556 ntBASIC3.77□□□□□ -1.81
APOC1P02654 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.77□□□□□ -1.81
APOC1P02654 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.77□□□□□ -1.81
APOC1P02654 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.77□□□□□ -1.81
APOC1P02654 OR5BC1P-201ENST00000529327 739 ntBASIC3.77□□□□□ -1.81
APOC1P02654 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
APOC1P02654 AC006064.5-201ENST00000541782 248 ntBASIC3.77□□□□□ -1.81
APOC1P02654 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC3.77□□□□□ -1.81
APOC1P02654 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.77□□□□□ -1.81
APOC1P02654 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms